RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-208	ENST00000527265	CNOT7	Q9UIV1	285 aa	Known RBP	4.13	□□□□□ -1.75
CLNS1A-208	ENST00000527265	RABL2B	Q9UNT1	228 aa		4.13	□□□□□ -1.75
CLNS1A-208	ENST00000527265	MTF2	Q9Y483	593 aa	Predicted RBP	4.13	□□□□□ -1.75
CLNS1A-208	ENST00000527265	RUSC2	Q8N2Y8	1516 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	SAC3D1	A6NKF1	404 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ZNF785	A8K8V0	405 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265		A8MV72	311 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	EFCAB8	A8MWE9	144 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265		M0QYG6	137 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	TSPAN4	O14817	238 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	TGFB1I1	O43294	461 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	CCP110	O43303	1012 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	DHH	O43323	396 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	HNRNPR	O43390	633 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	TNFSF14	O43557	240 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	FMO6P	O60774	539 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ENTPD3	O75355	529 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ITGA10	O75578	1167 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	SLC22A3	O75751	556 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	RPP40	O75818	363 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	KLHL18	O94889	574 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	METTL18	O95568	372 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	VIP	P01282	170 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	PIM1	P11309	404 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	MAK	P20794	623 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	COMT	P21964	271 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	TBXAS1	P24557	533 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	NFKBIA	P25963	317 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	EEF1D	P29692	281 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	CIITA	P33076	1130 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	CRHR1	P34998	444 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	BSG	P35613	385 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ALDH1A3	P47895	512 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	PTDSS1	P48651	473 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	STAT5B	P51692	787 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	DDR1	Q08345	913 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	MYO1E	Q12965	1108 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	GPS1	Q13098	491 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ATP1A4	Q13733	1029 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	CAMK1	Q14012	370 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	SLMAP	Q14BN4	828 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	EIF4H	Q15056	248 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	PPA1	Q15181	289 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	NPY5R	Q15761	445 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	C5orf22	Q49AR2	442 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	SETMAR	Q53H47	684 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ERMARD	Q5T6L9	678 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	GARNL3	Q5VVW2	1013 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	LIPM	Q5VYY2	423 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	SLC2A7	Q6PXP3	512 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	SYNE3	Q6ZMZ3	975 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	TAS1R1	Q7RTX1	841 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	NUP54	Q7Z3B4	507 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ZNF804A	Q7Z570	1209 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	UNC45B	Q8IWX7	931 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ULK2	Q8IYT8	1036 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	FRMD1	Q8N878	549 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	LSM14A	Q8ND56	463 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	IL17RD	Q8NFM7	739 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	NUDT10	Q8NFP7	164 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	PIGO	Q8TEQ8	1089 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	EDA	Q92838	391 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	PGAP3	Q96FM1	320 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	NUDT11	Q96G61	164 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	RBM17	Q96I25	401 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	WDR92	Q96MX6	357 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	SPATA5L1	Q9BVQ7	753 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	MAK16	Q9BXY0	300 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	PACSIN1	Q9BY11	444 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ANKRD2	Q9GZV1	360 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	SLC25A32	Q9H2D1	315 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	TTYH1	Q9H313	450 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	UNKL	Q9H9P5	680 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	SEC61A2	Q9H9S3	476 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	VEZT	Q9HBM0	779 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	BLOC1S6	Q9UL45	172 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	HPSE	Q9Y251	543 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ATP11B	Q9Y2G3	1177 aa		4.12	□□□□□ -1.75
CLNS1A-208	ENST00000527265	PNMA6E	A0A0J9YXQ4	647 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	KIF28P	B7ZC32	967 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	TAF4	O00268	1085 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	TP73	O15350	636 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	RRP9	O43818	475 aa	Known RBP	4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	RAMP2	O60895	175 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	GUCY1B2	O75343	617 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	TAF5L	O75529	589 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	CSPG5	O95196	566 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	HMGCR	P04035	888 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ICAM3	P32942	547 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	PTPN7	P35236	360 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ETV4	P43268	484 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ZNF135	P52742	658 aa	Predicted RBP	4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	UBASH3A	P57075	661 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	EVC	P57679	992 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	MXRA7	P84157	204 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	TOP3A	Q13472	1001 aa	Predicted RBP	4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	MED22	Q15528	200 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	CCDC142	Q17RM4	750 aa		4.11	□□□□□ -1.75
CLNS1A-208	ENST00000527265	TCP11X2	Q5H9J9	407 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms