RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 FAM90A27PA6NNH2 459 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 HNRNPCL2B2RXH8 293 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 LINC01387J3KSC0 135 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 L7N2F9 121 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CTAGE5O15320 804 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 BCAT2O15382 392 aaPredicted RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 PRPF4O43172 522 aaKnown RBP eCLIP4.7□□□□□ -1.66
CD44-213ENST00000525209 VEGFDO43915 354 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 HNRNPCL1O60812 293 aaKnown RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 ADAM11O75078 769 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 PCDH8O95206 1070 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 OR2C1O95371 312 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 STAMBPO95630 424 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 EIF2S1P05198 315 aaKnown RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 ASGR1P07306 291 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 TUBBP07437 444 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CTAGE8P0CG41 777 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 TSPY4P0CV99 314 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 TSPY10P0CW01 314 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 TPBGLP0DKB5 382 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 GHRP10912 638 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 VAV1P15498 845 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CDH2P19022 906 aaPredicted RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 CASTP20810 708 aaKnown RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 PTPN3P26045 913 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 HOXA10P31260 410 aaPredicted RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 BMP8BP34820 402 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 GNL1P36915 607 aaPredicted RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 GPR15P49685 360 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 LIG4P49917 911 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 NPY4RP50391 375 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 GBX2P52951 348 aaPredicted RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 CASP9P55211 416 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 RPL7AP62424 266 aaKnown RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 TUBB4BP68371 445 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 ARHGAP8P85298 464 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 RELQ04864 619 aaPredicted RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 PRKCZQ05513 592 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 RNASELQ05823 741 aaKnown RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 EXOSC9Q06265 439 aaKnown RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 GABPB1Q06547 395 aaPredicted RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 TRA2AQ13595 282 aaKnown RBP eCLIP4.7□□□□□ -1.66
CD44-213ENST00000525209 HABP2Q14520 560 aaPredicted RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 RPS6KA2Q15349 733 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 SYCP1Q15431 976 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 PRRT3Q5FWE3 981 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 COLEC12Q5KU26 742 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CCDC122Q5T0U0 273 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 XP32Q5T750 250 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CYP4A22Q5TCH4 519 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CENPPQ6IPU0 288 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 GADL1Q6ZQY3 521 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 PTCHD4Q6ZW05 846 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 MARK2Q7KZI7 788 aaKnown RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 CHST9Q7L1S5 443 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CACNA2D4Q7Z3S7 1137 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 DSG4Q86SJ6 1040 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CTAGE6Q86UF2 777 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 MIB1Q86YT6 1006 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CTAGE4Q8IX94 777 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 Q8N1Y9 231 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 IL22RA1Q8N6P7 574 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 FAM181AQ8N9Y4 354 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 SPERTQ8NA61 448 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 HIPK4Q8NE63 616 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 GPR156Q8NFN8 814 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 NLGN2Q8NFZ4 835 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 OR52K1Q8NGK4 314 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 PIP4K2CQ8TBX8 421 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 IFI44Q8TCB0 444 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 DUSP19Q8WTR2 217 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 GAB3Q8WWW8 586 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 WASF1Q92558 559 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 HOXB13Q92826 284 aaPredicted RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 RAB7BQ96AH8 199 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 NACC2Q96BF6 587 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 TCTN2Q96GX1 697 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CNOT6LQ96LI5 555 aaKnown RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 CMTM3Q96MX0 182 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 FIZ1Q96SL8 496 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 MIPEPQ99797 713 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 PACSIN1Q9BY11 444 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 TRIM7Q9C029 511 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 TAOK3Q9H2K8 898 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 EPB41L1Q9H4G0 881 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 KAT14Q9H8E8 782 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 JPH1Q9HDC5 661 aaPredicted RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 SEMA4BQ9NPR2 832 aaPredicted RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 SEMA3GQ9NS98 782 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 HOMER3Q9NSC5 361 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 ABCB8Q9NUT2 735 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 EXOC1Q9NV70 894 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CYP39A1Q9NYL5 469 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 EHD2Q9NZN4 543 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 SARDHQ9UL12 918 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 USP18Q9UMW8 372 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CHTOPQ9Y3Y2 248 aaKnown RBP4.7□□□□□ -1.66
CD44-213ENST00000525209 ASB3Q9Y575 518 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CLCA3PQ9Y6N3 262 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 KDM6BO15054 1643 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms