RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 VPS16Q9H269 839 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 ADAM21Q9UKJ8 722 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 FZD4Q9ULV1 537 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 ZBTB1Q9Y2K1 713 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 FRMD4BQ9Y2L6 1034 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 WNT6Q9Y6F9 365 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 SLC38A8A6NNN8 435 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 KIF28PB7ZC32 967 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 H0Y3Z8 333 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 PPP6R2O75170 966 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 ALADP13716 330 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 ADD2P35612 726 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 RAE1P78406 368 aaKnown RBP4.36□□□□□ -1.71
PCM1-220ENST00000523896 HOXA4Q00056 320 aaPredicted RBP4.36□□□□□ -1.71
PCM1-220ENST00000523896 SF3A3Q12874 501 aaKnown RBP eCLIP4.36□□□□□ -1.71
PCM1-220ENST00000523896 BIRC3Q13489 604 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 CBFBQ13951 182 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 KIAA1614Q5VZ46 1190 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 ZNF354CQ86Y25 554 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 SUGP1Q8IWZ8 645 aaKnown RBP4.36□□□□□ -1.71
PCM1-220ENST00000523896 SMAP1Q8IYB5 467 aaPredicted RBP4.36□□□□□ -1.71
PCM1-220ENST00000523896 FAM71DQ8N9W8 422 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 OR52L2PQ8NGH6 319 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 MAFAQ8NHW3 353 aaPredicted RBP4.36□□□□□ -1.71
PCM1-220ENST00000523896 HMGB4Q8WW32 186 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 CPT1BQ92523 772 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 NPIPB3Q92617 1050 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 RUBCNQ92622 972 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 SDCCAG3Q96C92 435 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 PRR11Q96HE9 360 aaPredicted RBP4.36□□□□□ -1.71
PCM1-220ENST00000523896 KAZALD1Q96I82 304 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 MACROD1Q9BQ69 325 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 FAM167BQ9BTA0 163 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 RNF26Q9BY78 433 aaPredicted RBP4.36□□□□□ -1.71
PCM1-220ENST00000523896 ELAC1Q9H777 363 aaKnown RBP4.36□□□□□ -1.71
PCM1-220ENST00000523896 USP29Q9HBJ7 922 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 ITM2CQ9NQX7 267 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 ASIC5Q9NY37 505 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 TFCP2L1Q9NZI6 479 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 SEMA5BQ9P283 1151 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 KIF17Q9P2E2 1029 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 PCDHB2Q9Y5E7 798 aa4.36□□□□□ -1.71
PCM1-220ENST00000523896 HMX3A6NHT5 357 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 LRRC3CA6NJW4 275 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 BTBD19C9JJ37 291 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 H3BNC9 293 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 NKX2-8O15522 239 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 EXOC3O60645 756 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 MT-CO3P00414 261 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 DUSP1P28562 367 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 SERPINA4P29622 427 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 GALNSP34059 522 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 THBS4P35443 961 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 JAK3P52333 1124 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 COPB1P53618 953 aaKnown RBP4.35□□□□□ -1.71
PCM1-220ENST00000523896 PRKAA2P54646 552 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 TAF5Q15542 800 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 AAK1Q2M2I8 961 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 ADCK5Q3MIX3 580 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 C16orf89Q6UX73 402 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 MOGAT3Q86VF5 341 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 ANKRD18AQ8IVF6 992 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 OR6Y1Q8NGX8 325 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 REXO5Q96IC2 774 aaKnown RBP4.35□□□□□ -1.71
PCM1-220ENST00000523896 TRAPPC9Q96Q05 1148 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 MECRQ9BV79 373 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.35□□□□□ -1.71
PCM1-220ENST00000523896 TWSG1Q9GZX9 223 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 CDCP1Q9H5V8 836 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 G6PC2Q9NQR9 355 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 ABHD10Q9NUJ1 306 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 LIN7CQ9NUP9 197 aaKnown RBP4.35□□□□□ -1.71
PCM1-220ENST00000523896 NDUFAF4Q9P032 175 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 ARPP21Q9UBL0 812 aaPredicted RBP4.35□□□□□ -1.71
PCM1-220ENST00000523896 SERGEFQ9UGK8 458 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 PCDHB7Q9Y5E2 793 aa4.35□□□□□ -1.71
PCM1-220ENST00000523896 TARM1B6A8C7 271 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 M0QYT0 321 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 RBMXL2O75526 392 aaKnown RBP4.34□□□□□ -1.71
PCM1-220ENST00000523896 ABCG1P45844 678 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 MCM2P49736 904 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 RBM6P78332 1123 aaKnown RBP4.34□□□□□ -1.71
PCM1-220ENST00000523896 TLE3Q04726 772 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 SRSF4Q08170 494 aaKnown RBP4.34□□□□□ -1.71
PCM1-220ENST00000523896 EFR3AQ14156 821 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 LARS2Q15031 903 aaKnown RBP4.34□□□□□ -1.71
PCM1-220ENST00000523896 RPS6KA2Q15349 733 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 TBRG1Q3YBR2 411 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 GALNTL6Q49A17 601 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 HSP90AB4PQ58FF6 505 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 FBXO47Q5MNV8 452 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 SUMO4Q6EEV6 95 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 ZNF788Q6ZQV5 615 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 DCDC5Q6ZRR9 648 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 AMIGO2Q86SJ2 522 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 FTSJ3Q8IY81 847 aaKnown RBP4.34□□□□□ -1.71
PCM1-220ENST00000523896 SMG7Q92540 1137 aaKnown RBP4.34□□□□□ -1.71
PCM1-220ENST00000523896 C3orf49Q96BT1 292 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 HS6ST2Q96MM7 605 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 FYTTD1Q96QD9 318 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms