RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 M0QYT0 321 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 ACTL6BO94805 426 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 MATN1P21941 496 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 AKT1P31749 480 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 GRK6P43250 576 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 SLC14A1Q13336 389 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 GAB1Q13480 694 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 BTBD16Q32M84 506 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 SULT6B1Q6IMI4 303 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 JMJD6Q6NYC1 403 aaPredicted RBP5.29□□□□□ -1.56
PCM1-219ENST00000523540 ZNF782Q6ZMW2 699 aaPredicted RBP5.29□□□□□ -1.56
PCM1-219ENST00000523540 KRT27Q7Z3Y8 459 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 SLC44A2Q8IWA5 706 aaPredicted RBP5.29□□□□□ -1.56
PCM1-219ENST00000523540 PNLDC1Q8NA58 520 aaKnown RBP5.29□□□□□ -1.56
PCM1-219ENST00000523540 SCAMP5Q8TAC9 235 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 ZNF398Q8TD17 642 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 PNISRQ8TF01 805 aaKnown RBP5.29□□□□□ -1.56
PCM1-219ENST00000523540 ASB2Q96Q27 587 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 MECRQ9BV79 373 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 TMEM120AQ9BXJ8 343 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 ADGRE3Q9BY15 652 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 CDCP1Q9H5V8 836 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 NFU1Q9UMS0 254 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 CNTN6Q9UQ52 1028 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 ZBTB1Q9Y2K1 713 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 RIPOR2Q9Y4F9 1068 aa5.29□□□□□ -1.56
PCM1-219ENST00000523540 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.28□□□□□ -1.56
PCM1-219ENST00000523540 C16orf96A6NNT2 1141 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 KIF28PB7ZC32 967 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 PIP5K1CO60331 668 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 CYP2D6P10635 497 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 CYP2A6P11509 494 aaPredicted RBP5.28□□□□□ -1.56
PCM1-219ENST00000523540 CERS1P27544 350 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 WDR5P61964 334 aaKnown RBP5.28□□□□□ -1.56
PCM1-219ENST00000523540 AP2B1P63010 937 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 AAK1Q2M2I8 961 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 ATPAF1Q5TC12 328 aaPredicted RBP5.28□□□□□ -1.56
PCM1-219ENST00000523540 KLHL17Q6TDP4 642 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 VSTM1Q6UX27 236 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 RANBP10Q6VN20 620 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 KYAT3Q6YP21 454 aaKnown RBP5.28□□□□□ -1.56
PCM1-219ENST00000523540 SRRM1Q8IYB3 904 aaKnown RBP5.28□□□□□ -1.56
PCM1-219ENST00000523540 MORC4Q8TE76 937 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 TRAPPC12Q8WVT3 735 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 HIC2Q96JB3 615 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 DDX23Q9BUQ8 820 aaKnown RBP5.28□□□□□ -1.56
PCM1-219ENST00000523540 ELOVL1Q9BW60 279 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 RNF26Q9BY78 433 aaPredicted RBP5.28□□□□□ -1.56
PCM1-219ENST00000523540 VPS16Q9H269 839 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 PPCSQ9HAB8 311 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 ADARB2Q9NS39 739 aaKnown RBP5.28□□□□□ -1.56
PCM1-219ENST00000523540 DAPP1Q9UN19 280 aa5.28□□□□□ -1.56
PCM1-219ENST00000523540 IPO5O00410 1097 aaKnown RBP5.27□□□□□ -1.57
PCM1-219ENST00000523540 PRYO14603 147 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 NKX2-8O15522 239 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 PPP6R2O75170 966 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 SFPQP23246 707 aaKnown RBP eCLIP5.27□□□□□ -1.57
PCM1-219ENST00000523540 THBS4P35443 961 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 HALP42357 657 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 AGTR2P50052 363 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 CDK7P50613 346 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 FOXF2Q12947 444 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 CERKLQ49MI3 558 aaPredicted RBP5.27□□□□□ -1.57
PCM1-219ENST00000523540 NFRKBQ6P4R8 1299 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 CCDC117Q8IWD4 279 aaPredicted RBP5.27□□□□□ -1.57
PCM1-219ENST00000523540 C8orf58Q8NAV2 365 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 AKAP1Q92667 903 aaKnown RBP eCLIP5.27□□□□□ -1.57
PCM1-219ENST00000523540 TRMT61AQ96FX7 289 aaKnown RBP5.27□□□□□ -1.57
PCM1-219ENST00000523540 LTV1Q96GA3 475 aaPredicted RBP5.27□□□□□ -1.57
PCM1-219ENST00000523540 FAR2Q96K12 515 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 PSMD1Q99460 953 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 HERPUD2Q9BSE4 406 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 SRP68Q9UHB9 627 aaKnown RBP5.27□□□□□ -1.57
PCM1-219ENST00000523540 FRMD4BQ9Y2L6 1034 aa5.27□□□□□ -1.57
PCM1-219ENST00000523540 MORC2Q9Y6X9 1032 aaPredicted RBP5.27□□□□□ -1.57
PCM1-219ENST00000523540 SLC38A8A6NNN8 435 aa5.26□□□□□ -1.57
PCM1-219ENST00000523540 TMEM232C9JQI7 657 aa5.26□□□□□ -1.57
PCM1-219ENST00000523540 EIF3JO75822 258 aaKnown RBP5.26□□□□□ -1.57
PCM1-219ENST00000523540 LARGE1O95461 756 aa5.26□□□□□ -1.57
PCM1-219ENST00000523540 FAM3BP58499 235 aaPredicted RBP5.26□□□□□ -1.57
PCM1-219ENST00000523540 RPL15P61313 204 aaKnown RBP5.26□□□□□ -1.57
PCM1-219ENST00000523540 SF3A3Q12874 501 aaKnown RBP eCLIP5.26□□□□□ -1.57
PCM1-219ENST00000523540 POSTNQ15063 836 aa5.26□□□□□ -1.57
PCM1-219ENST00000523540 SEC23BQ15437 767 aa5.26□□□□□ -1.57
PCM1-219ENST00000523540 CNGA3Q16281 694 aa5.26□□□□□ -1.57
PCM1-219ENST00000523540 TTC22Q5TAA0 569 aa5.26□□□□□ -1.57
PCM1-219ENST00000523540 ANO1Q5XXA6 986 aa5.26□□□□□ -1.57
PCM1-219ENST00000523540 ZNF66Q6ZN08 573 aa5.26□□□□□ -1.57
PCM1-219ENST00000523540 LAS2Q8IYD9 372 aa5.26□□□□□ -1.57
PCM1-219ENST00000523540 CCT6BQ92526 530 aa5.26□□□□□ -1.57
PCM1-219ENST00000523540 MYLK2Q9H1R3 596 aa5.26□□□□□ -1.57
PCM1-219ENST00000523540 CCDC134Q9H6E4 229 aa5.26□□□□□ -1.57
PCM1-219ENST00000523540 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.25□□□□□ -1.57
PCM1-219ENST00000523540 EFCAB8A8MWE9 144 aa5.25□□□□□ -1.57
PCM1-219ENST00000523540 CST5P28325 142 aaPredicted RBP5.25□□□□□ -1.57
PCM1-219ENST00000523540 NDUFS1P28331 727 aa5.25□□□□□ -1.57
PCM1-219ENST00000523540 HOXD12P35452 270 aa5.25□□□□□ -1.57
PCM1-219ENST00000523540 ZNF84P51523 738 aa5.25□□□□□ -1.57
PCM1-219ENST00000523540 FOXL2P58012 376 aa5.25□□□□□ -1.57
PCM1-219ENST00000523540 CBFBQ13951 182 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms