RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 TMEM209Q96SK2 561 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 NFKBIZQ9BYH8 718 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 RNF32Q9H0A6 362 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 FBRSL1Q9HCM7 1045 aaKnown RBP6.91□□□□□ -1.3
VPS13B-211ENST00000522802 RGL1Q9NZL6 768 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 ANKFY1Q9P2R3 1169 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 FBXL5Q9UKA1 691 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 NAP1L2Q9ULW6 460 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-211ENST00000522802 GDAQ9Y2T3 454 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 ATXN2Q99700 1313 aaKnown RBP6.91□□□□□ -1.3
VPS13B-211ENST00000522802 NID2Q14112 1375 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 PLXND1Q9Y4D7 1925 aa6.91□□□□□ -1.3
VPS13B-211ENST00000522802 MUC22E2RYF6 1773 aaPredicted RBP6.9□□□□□ -1.3
VPS13B-211ENST00000522802 DENND4CQ5VZ89 1909 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 CYP3A7-CYP3A51PA0A087WV96 503 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 LRRIQ4A6NIV6 560 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 EIF4E1BA6NMX2 242 aaKnown RBP6.9□□□□□ -1.3
VPS13B-211ENST00000522802 APBB3O95704 486 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 GLI1P08151 1106 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 PLA2G2AP14555 144 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 CYP3A7P24462 503 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 ARL2P36404 184 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 EXOSC10Q01780 885 aaKnown RBP6.9□□□□□ -1.3
VPS13B-211ENST00000522802 SEMA3BQ13214 749 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 KIR3DS1Q14943 382 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 KCNMB1Q16558 191 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 ITPRIPL2Q3MIP1 535 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 ARHGAP29Q52LW3 1261 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 ACBD5Q5T8D3 534 aaPredicted RBP6.9□□□□□ -1.3
VPS13B-211ENST00000522802 FOXB2Q5VYV0 432 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 TRIM68Q6AZZ1 485 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 GAREM2Q75VX8 874 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 CPNE8Q86YQ8 564 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 JAMLQ86YT9 394 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 CCDC103Q8IW40 242 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 SCUBE1Q8IWY4 988 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 C4orf19Q8IY42 314 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 ELMOD1Q8N336 334 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 TTC9BQ8N6N2 239 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 LEMD2Q8NC56 503 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 CCDC148Q8NFR7 591 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 RPLP0P6Q8NHW5 317 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 BICD2Q8TD16 824 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 E2F7Q96AV8 911 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 DYDC2Q96IM9 177 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 ZNF512Q96ME7 567 aaPredicted RBP6.9□□□□□ -1.3
VPS13B-211ENST00000522802 KRTAP4-9Q9BYQ8 210 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 POLR3FQ9H1D9 316 aaPredicted RBP6.9□□□□□ -1.3
VPS13B-211ENST00000522802 CRTAC1Q9NQ79 661 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 HPS4Q9NQG7 708 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 DDX25Q9UHL0 483 aaKnown RBP6.9□□□□□ -1.3
VPS13B-211ENST00000522802 TMEFF2Q9UIK5 374 aaPredicted RBP6.9□□□□□ -1.3
VPS13B-211ENST00000522802 GPR160Q9UJ42 338 aa6.9□□□□□ -1.3
VPS13B-211ENST00000522802 ASXL3Q9C0F0 2248 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 MGAQ8IWI9 3026 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 COL12A1Q99715 3063 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 C7orf72A4D263 438 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 ZNF503-AS2A6NEH8 195 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 ANTXRLA6NF34 631 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-211ENST00000522802 PODXLO00592 558 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 ATG13O75143 517 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 SOAT2O75908 522 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 OR4Q2P0C623 313 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 ENGP17813 658 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 PTGER3P43115 390 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 DHPSP49366 369 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-211ENST00000522802 MCM2P49736 904 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 DGKEP52429 567 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 CORO7P57737 925 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 CYP4F8P98187 520 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 MVKQ03426 396 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 POU5F1BQ06416 359 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 GRSF1Q12849 480 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS13B-211ENST00000522802 DMC1Q14565 340 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 NECTIN1Q15223 517 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 NPY5RQ15761 445 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 ADCK5Q3MIX3 580 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 CTXN3Q4LDR2 81 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 TRIM61Q5EBN2 209 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 ZC3H12BQ5HYM0 836 aaKnown RBP6.89□□□□□ -1.31
VPS13B-211ENST00000522802 TPGS2Q68CL5 300 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 MBLAC2Q68D91 279 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 CDCA2Q69YH5 1023 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-211ENST00000522802 NCAPH2Q6IBW4 605 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 HAUS6Q7Z4H7 955 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 EXOC8Q8IYI6 725 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 CAMKK1Q8N5S9 505 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 OR2I1PQ8NGU4 316 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 BPIFB1Q8TDL5 484 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 THAP3Q8WTV1 239 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-211ENST00000522802 FAM168AQ92567 244 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 PIGKQ92643 395 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 PGLYRP2Q96PD5 576 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 SLKQ9H2G2 1235 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-211ENST00000522802 RWDD1Q9H446 243 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-211ENST00000522802 EBF3Q9H4W6 596 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 SLC32A1Q9H598 525 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 KCNMB3Q9NPA1 279 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 TMEM74BQ9NUR3 256 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms