RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 CYB5R4Q7L1T6 521 aa6.65□□□□□ -1.34
PABPC1-216ENST00000520868 ZNF572Q7Z3I7 529 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-216ENST00000520868 PLXDC1Q8IUK5 500 aa6.65□□□□□ -1.34
PABPC1-216ENST00000520868 PROKR1Q8TCW9 393 aa6.65□□□□□ -1.34
PABPC1-216ENST00000520868 NEK9Q8TD19 979 aa6.65□□□□□ -1.34
PABPC1-216ENST00000520868 PIBF1Q8WXW3 757 aa6.65□□□□□ -1.34
PABPC1-216ENST00000520868 PABPC5Q96DU9 382 aaKnown RBP6.65□□□□□ -1.34
PABPC1-216ENST00000520868 ADI1Q9BV57 179 aa6.65□□□□□ -1.34
PABPC1-216ENST00000520868 CCM2LQ9NUG4 571 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-216ENST00000520868 MAP3K20Q9NYL2 800 aaKnown RBP6.65□□□□□ -1.34
PABPC1-216ENST00000520868 SCOCQ9UIL1 159 aa6.65□□□□□ -1.34
PABPC1-216ENST00000520868 PTPRSQ13332 1948 aa6.65□□□□□ -1.34
PABPC1-216ENST00000520868 PIEZO1Q92508 2521 aa6.65□□□□□ -1.35
PABPC1-216ENST00000520868 MYO7AQ13402 2215 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 K7ESF4 209 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 LEFTY2O00292 366 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 DCXO43602 365 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 CTNNB1P35222 781 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 NT5C2P49902 561 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 PER3P56645 1201 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 SRSF2Q01130 221 aaKnown RBP6.64□□□□□ -1.35
PABPC1-216ENST00000520868 NHLH2Q02577 135 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 GHRHRQ02643 423 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 SP140Q13342 867 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 NEDD9Q14511 834 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 CHD1LQ86WJ1 897 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 MTMR8Q96EF0 704 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 MYEOVQ96EZ4 313 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 IFIH1Q9BYX4 1025 aaKnown RBP6.64□□□□□ -1.35
PABPC1-216ENST00000520868 MOCS1Q9NZB8 636 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 HS3ST4Q9Y661 456 aa6.64□□□□□ -1.35
PABPC1-216ENST00000520868 HIP1O00291 1037 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 IFIT3O14879 490 aaKnown RBP6.63□□□□□ -1.35
PABPC1-216ENST00000520868 GRM6O15303 877 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 CYTH3O43739 400 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 ENDOD1O94919 500 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 IGHDP01880 384 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 GHRP10912 638 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 ZSCAN20P17040 1043 aaPredicted RBP6.63□□□□□ -1.35
PABPC1-216ENST00000520868 HOXC8P31273 242 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 ICAM3P32942 547 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 BMPR1AP36894 532 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 MTNR1BP49286 362 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 COL4A4P53420 1690 aaPredicted RBP6.63□□□□□ -1.35
PABPC1-216ENST00000520868 CLRN1P58418 232 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 TRDNQ13061 729 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 TRAF1Q13077 416 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 GRM4Q14833 912 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 LAIR1Q6GTX8 287 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 METTL7BQ6UX53 244 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 Q6ZVL8 140 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 RPAINQ86UA6 219 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 SMC5Q8IY18 1101 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 SAMD3Q8N6K7 520 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 APBB2Q92870 758 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 TTPALQ9BTX7 342 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 IL25Q9H293 177 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 RWDD1Q9H446 243 aaPredicted RBP6.63□□□□□ -1.35
PABPC1-216ENST00000520868 RIOX1Q9H6W3 641 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 FAM50BQ9Y247 325 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 CHST2Q9Y4C5 530 aa6.63□□□□□ -1.35
PABPC1-216ENST00000520868 MYH7BA7E2Y1 1941 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 KIAA1217Q5T5P2 1943 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 ERICH2A1L162 156 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 LINC01565O15544 149 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 FIBPO43427 364 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 CAND2O75155 1236 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 CHRNA1P02708 482 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 RB1P06400 928 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 MARK3P27448 753 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 RNASE9P60153 205 aaKnown RBP6.62□□□□□ -1.35
PABPC1-216ENST00000520868 NUCB1Q02818 461 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 HYAL1Q12794 435 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 BTG3Q14201 252 aaPredicted RBP6.62□□□□□ -1.35
PABPC1-216ENST00000520868 ATXN7L2Q5T6C5 722 aaPredicted RBP6.62□□□□□ -1.35
PABPC1-216ENST00000520868 USP17L6PQ6QN14 398 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 SYT12Q8IV01 421 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 ADHFE1Q8IWW8 467 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 PQLC1Q8N2U9 271 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 RNF169Q8NCN4 708 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 COG1Q8WTW3 980 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 INPP4AQ96PE3 977 aaPredicted RBP6.62□□□□□ -1.35
PABPC1-216ENST00000520868 UPF3BQ9BZI7 483 aaKnown RBP6.62□□□□□ -1.35
PABPC1-216ENST00000520868 ZNF768Q9H5H4 540 aaKnown RBP6.62□□□□□ -1.35
PABPC1-216ENST00000520868 ALG13Q9NP73 1137 aaKnown RBP6.62□□□□□ -1.35
PABPC1-216ENST00000520868 AKIP1Q9NQ31 210 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 LANCL2Q9NS86 450 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 ZNF215Q9UL58 517 aaPredicted RBP6.62□□□□□ -1.35
PABPC1-216ENST00000520868 GPR45Q9Y5Y3 372 aa6.62□□□□□ -1.35
PABPC1-216ENST00000520868 NRCAMQ92823 1304 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 TMEM200CA6NKL6 621 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 FAM171A2A8MVW0 826 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 CXorf49A8MYA2 514 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-216ENST00000520868 MBTPS2O43462 519 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 NCK2O43639 380 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 ATP9AO75110 1047 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 STAM2O75886 525 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 RHOBTB3O94955 611 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 CYP21A2P08686 494 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 ALOX15P16050 662 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms