RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SLC10A2Q12908 348 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 KCNB1Q14721 858 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 GRM4Q14833 912 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 PROSER3Q2NL68 480 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 TRIM60Q495X7 471 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 PRAMEF17Q5VTA0 474 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 ACSM6Q6P461 480 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 CCDC174Q6PII3 467 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 ZNF788Q6ZQV5 615 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 RAB11FIP2Q7L804 512 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 SPATA5Q8NB90 893 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 TRAPPC12Q8WVT3 735 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 GLMPQ8WWB7 406 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 FAR2Q96K12 515 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 RITA1Q96K30 269 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 HERPUD2Q9BSE4 406 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 RTKNQ9BST9 563 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 PAGR1Q9BTK6 254 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 KCNK9Q9NPC2 374 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 SEMA5BQ9P283 1151 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 COL11A2P13942 1736 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 RAPGEF2Q9Y4G8 1499 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 CCDC187A0A096LP49 1063 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 LINC01548A6NM66 108 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 PRRT4C9JH25 899 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 TMEM232C9JQI7 657 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 SMIM22K7EJ46 135 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 FYB1O15117 783 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 ACTL6BO94805 426 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 TNFRSF6BO95407 300 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 LARGE1O95461 756 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 CER1O95813 267 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 SLC3A2P08195 630 aaKnown RBP3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 ATF7P17544 494 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 GALNSP34059 522 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 DEKP35659 375 aaKnown RBP3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 WDR5P61964 334 aaKnown RBP3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 AP2B1P63010 937 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 TFF2Q03403 129 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 MFSD13AQ14CX5 517 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 CNGA3Q16281 694 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 TUBB8Q3ZCM7 444 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 ZNF569Q5MCW4 686 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 KIAA1614Q5VZ46 1190 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 NFRKBQ6P4R8 1299 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 KLHL17Q6TDP4 642 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 CHSY1Q86X52 802 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 SLC44A2Q8IWA5 706 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 CCDC117Q8IWD4 279 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 PNLDC1Q8NA58 520 aaKnown RBP3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 OTUD7AQ8TE49 926 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 SLC22A17Q8WUG5 538 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 CCT6BQ92526 530 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 PRR11Q96HE9 360 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 SEMA4CQ9C0C4 833 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 MAGEH1Q9H213 219 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 CDCP1Q9H5V8 836 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 ABHD10Q9NUJ1 306 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 SCAF8Q9UPN6 1271 aaKnown RBP3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 PCDHB2Q9Y5E7 798 aa3.76□□□□□ -1.81
HMGB1P41-201ENST00000520234 BIVM-ERCC5R4GMW8 1640 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 TISP43B9A030 160 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 TRIM38O00635 465 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 IKBKBO14920 756 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 NKX2-8O15522 239 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 RPP40O75818 363 aaKnown RBP3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 MBPP02686 304 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 KLRK1P26718 216 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 CERS1P27544 350 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 AKT1P31749 480 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 PROK1P58294 105 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 RAE1P78406 368 aaKnown RBP3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 GPR162Q16538 588 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 AAK1Q2M2I8 961 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 TBRG1Q3YBR2 411 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 GLE1Q53GS7 698 aaKnown RBP3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 CC2D1BQ5T0F9 858 aaKnown RBP3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 RANBP10Q6VN20 620 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 SMC5Q8IY18 1101 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 C16orf71Q8IYS4 520 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 NKAPQ8N5F7 415 aaKnown RBP3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 MYCT1Q8N699 235 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 STT3BQ8TCJ2 826 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 ZNF398Q8TD17 642 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 NPIPB3Q92617 1050 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 REXO5Q96IC2 774 aaKnown RBP3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 DDX23Q9BUQ8 820 aaKnown RBP3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 TMEM120AQ9BXJ8 343 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 MYLK2Q9H1R3 596 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 PABPC3Q9H361 631 aaKnown RBP3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 PRDM8Q9NQV8 689 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 C19orf53Q9UNZ5 99 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 ZBTB1Q9Y2K1 713 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 PCDHB7Q9Y5E2 793 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 SIRT4Q9Y6E7 314 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 KIF27Q86VH2 1401 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 MAP3K1Q13233 1512 aa3.75□□□□□ -1.81
HMGB1P41-201ENST00000520234 CUX2O14529 1486 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 LOC105369274A0A096LPK9 316 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms