RNA–Protein interactions for RNA: ENST00000520143.1

IGHV3-57-201, Transcript of immunoglobulin heavy variable 3-57 (pseudogene), humanhuman

BASIC

Gene IGHV3-57, Length 280 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-57-201ENST00000520143 USP29Q9HBJ7 922 aa6.89□□□□□ -1.31
IGHV3-57-201ENST00000520143 WDR6Q9NNW5 1121 aaKnown RBP6.89□□□□□ -1.31
IGHV3-57-201ENST00000520143 PRDM9Q9NQV7 894 aa6.89□□□□□ -1.31
IGHV3-57-201ENST00000520143 TMEM30AQ9NV96 361 aa6.89□□□□□ -1.31
IGHV3-57-201ENST00000520143 TMLHEQ9NVH6 421 aa6.89□□□□□ -1.31
IGHV3-57-201ENST00000520143 CWC15Q9P013 229 aaKnown RBP6.89□□□□□ -1.31
IGHV3-57-201ENST00000520143 PAK5Q9P286 719 aa6.89□□□□□ -1.31
IGHV3-57-201ENST00000520143 FBXW11Q9UKB1 542 aa6.89□□□□□ -1.31
IGHV3-57-201ENST00000520143 LRFN2Q9ULH4 789 aa6.89□□□□□ -1.31
IGHV3-57-201ENST00000520143 NAALADL1Q9UQQ1 740 aa6.89□□□□□ -1.31
IGHV3-57-201ENST00000520143 RAD54BQ9Y620 910 aa6.89□□□□□ -1.31
IGHV3-57-201ENST00000520143 SHROOM3Q8TF72 1996 aa6.89□□□□□ -1.31
IGHV3-57-201ENST00000520143 DOCK4Q8N1I0 1966 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 LTBP2Q14767 1821 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 A0A087WUV0 522 aaPredicted RBP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 SRRM3A6NNA2 597 aaPredicted RBP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 DCDC2CA8MYV0 355 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 E7ESA3 106 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 TNFRSF10BO14763 440 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 RASGRF2O14827 1237 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 CHADO15335 359 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 RGS16O15492 202 aaPredicted RBP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 GCATO75600 419 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 DGKIO75912 1065 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 SHBGP04278 402 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 NCAM1P13591 858 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 GOT1P17174 413 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 CAPN2P17655 700 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 FGFR3P22607 806 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 AMPD1P23109 780 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 MAGEA6P43360 314 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 LMAN1P49257 510 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 CTCFP49711 727 aaPredicted RBP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 CDR1P51861 262 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 ARL4CP56559 192 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 PPP2R2AP63151 447 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 PITX1P78337 314 aaPredicted RBP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 HTRA3P83110 453 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 DMTNQ08495 405 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 SMARCB1Q12824 385 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 SEMA3BQ13214 749 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 PAFAH1B3Q15102 231 aaKnown RBP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 MTFR1Q15390 333 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 HIF1AQ16665 826 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 SLC45A4Q5BKX6 768 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 PLA2G2CQ5R387 149 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 BSPRYQ5W0U4 402 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 NCBP2-AS2Q69YL0 99 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 ZNF280DQ6N043 979 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 SLC39A5Q6ZMH5 540 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 PPP1R21Q6ZMI0 780 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 LIAT1Q6ZQX7 453 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 PDZD4Q76G19 769 aaPredicted RBP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 ZC3H18Q86VM9 953 aaKnown RBP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 RIBC1Q8N443 379 aaPredicted RBP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 SH2D3CQ8N5H7 860 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 SLC7A14Q8TBB6 771 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 RNF139Q8WU17 664 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 C8orf48Q96LL4 319 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 OLFM3Q96PB7 478 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 QKIQ96PU8 341 aaKnown RBP eCLIP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 TMEM209Q96SK2 561 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 USB1Q9BQ65 265 aaKnown RBP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 CAPS2Q9BXY5 557 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 RNF208Q9H0X6 261 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 CENPHQ9H3R5 247 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 CNOT10Q9H9A5 744 aaKnown RBP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 PPCSQ9HAB8 311 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 SAYSD1Q9NPB0 183 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 ABCC13Q9NSE7 274 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 PIGVQ9NUD9 493 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 COMMD8Q9NX08 183 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 CALCOCO1Q9P1Z2 691 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 BCCIPQ9P287 314 aaKnown RBP eCLIP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 DNAJB4Q9UDY4 337 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 ADAM28Q9UKQ2 775 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 NOVA2Q9UNW9 492 aaKnown RBP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 PRG3Q9Y2Y8 225 aaPredicted RBP6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 PCDHB5Q9Y5E4 795 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 HEY1Q9Y5J3 304 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 DNAH12Q6ZR08 3092 aa6.88□□□□□ -1.31
IGHV3-57-201ENST00000520143 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 TLDC2A0PJX2 215 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 C5orf60A6NFR6 353 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 E7EVH7 732 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 F8W810 466 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 H7C4K7 107 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 EEF2KO00418 725 aaKnown RBP6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 NCAM2O15394 837 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 KCNN4O15554 427 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 PQBP1O60828 265 aaKnown RBP6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 ACSL3O95573 720 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 IGLV3-25P01717 112 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 RBL1P28749 1068 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 ATP5DP30049 168 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 HTR7P34969 479 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 RFC2P35250 354 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 GRIK1P39086 918 aa6.87□□□□□ -1.31
IGHV3-57-201ENST00000520143 MDH1P40925 334 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms