RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 CD33P20138 364 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 HOXD12P35452 270 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 PTGER3P43115 390 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 CASP4P49662 377 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 CDH8P55286 799 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 CLDN10P78369 228 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 RPL6Q02878 288 aaKnown RBP9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 TNP2Q05952 138 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 GOLGA8FQ08AF8 430 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 GOLGA8DPQ0D2H9 430 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 KNOP1Q1ED39 458 aaKnown RBP9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 BMT2Q1RMZ1 405 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 C10orf76Q5T2E6 689 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 EMC10Q5UCC4 262 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 SNX30Q5VWJ9 437 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 SDE2Q6IQ49 451 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 SLC23A3Q6PIS1 610 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 RABEPKQ7Z6M1 372 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 BBS7Q8IWZ6 715 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 ETFBKMTQ8IXQ9 262 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 C12orf56Q8IXR9 622 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 FRMD1Q8N878 549 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 TERB1Q8NA31 727 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 DEFB124Q8NES8 71 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 XPO6Q96QU8 1125 aaKnown RBP9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 BLZF1Q9H2G9 400 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 FBXO44Q9H4M3 255 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 SLC39A2Q9NP94 309 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 TLR8Q9NR97 1041 aaKnown RBP9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 SPHK2Q9NRA0 654 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 KRT82Q9NSB4 513 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 COMMD8Q9NX08 183 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 FAM13BQ9NYF5 915 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 GMIPQ9P107 970 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 PTPRBP23467 1997 aa9.4□□□□□ -0.9
CDC42SE2-212ENST00000515533 ATRXP46100 2492 aa9.4□□□□□ -0.91
CDC42SE2-212ENST00000515533 NUMA1Q14980 2115 aa9.4□□□□□ -0.91
CDC42SE2-212ENST00000515533 FREM2Q5SZK8 3169 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 PVALEFA0A1B0GWK0 134 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 LRRIQ3A6PVS8 624 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 SPINK2P20155 84 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 ITPKAP23677 461 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 CASP1P29466 404 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 NTSR1P30989 418 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 AFMP43652 599 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 ME1P48163 572 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 EHHADHQ08426 723 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 MAP7D1Q3KQU3 841 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 GRAMD4Q6IC98 578 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 SHC4Q6S5L8 630 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 SLC36A4Q6YBV0 504 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 ACOT1Q86TX2 421 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 CEP57L1Q8IYX8 460 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 CHPFQ8IZ52 775 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 FUKQ8N0W3 1084 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 HDDC3Q8N4P3 179 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 CEP76Q8TAP6 659 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 PARD3BQ8TEW8 1205 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 DUSP9Q99956 384 aaKnown RBP9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 SCNM1Q9BWG6 230 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 GTPBP2Q9BX10 602 aaKnown RBP9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 BBS2Q9BXC9 721 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 TMEM74BQ9NUR3 256 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 DNAJC17Q9NVM6 304 aaKnown RBP9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 CALCOCO1Q9P1Z2 691 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 MBD1Q9UIS9 605 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 LSM7Q9UK45 103 aaKnown RBP9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 PILRBQ9UKJ0 227 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 DOLKQ9UPQ8 538 aa9.39□□□□□ -0.91
CDC42SE2-212ENST00000515533 BAHCC1Q9P281 2608 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 FAM92AA1XBS5 289 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 TMEM8BA6NDV4 472 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 NEDD8-MDP1E9PL57 170 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 ZNF217O75362 1048 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 ZDHHC11BP0C7U3 371 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 FAM200BP0CF97 657 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 CCDC130P13994 396 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 ATP5C1P36542 298 aaKnown RBP9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 WASP42768 502 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 MAP3K7CLP57077 242 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 GFPT1Q06210 699 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 ZNF33AQ06730 810 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 ORC1Q13415 861 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 CUL4BQ13620 913 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 DUOXA1Q1HG43 343 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 SGSM1Q2NKQ1 1148 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 FOXD4L6Q3SYB3 417 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 KIAA1211LQ6NV74 962 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 FOXD4L3Q6VB84 417 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 TPGS1Q6ZTW0 290 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 PAQR9Q6ZVX9 377 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 TMEM25Q86YD3 366 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 SLC2A14Q8TDB8 520 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 FOXD4L4Q8WXT5 416 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 IMPG2Q9BZV3 1241 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 FAM49BQ9NUQ9 324 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 IL37Q9NZH6 218 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 WDR35Q9P2L0 1181 aa9.38□□□□□ -0.91
CDC42SE2-212ENST00000515533 SLC6A14Q9UN76 642 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms