RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 TAF5Q15542 800 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 TEAD4Q15561 434 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 ELF2Q15723 593 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 CCDC142Q17RM4 750 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 ARL13BQ3SXY8 428 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 MAP9Q49MG5 647 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 DCAF6Q58WW2 860 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 BRMS1LQ5PSV4 323 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 ERMARDQ5T6L9 678 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 PDE12Q6L8Q7 609 aaKnown RBP9.46□□□□□ -0.9
NR1I3-230ENST00000511944 DENND5BQ6ZUT9 1274 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 SND1Q7KZF4 910 aaKnown RBP eCLIP9.46□□□□□ -0.9
NR1I3-230ENST00000511944 GPRIN1Q7Z2K8 1008 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 TADA2BQ86TJ2 420 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 CCDC50Q8IVM0 306 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 C7orf61Q8IZ16 206 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 DEFB106AQ8N104 65 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 PRELID2Q8N945 189 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 LRRN4CLQ8ND94 238 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 CCHCR1Q8TD31 782 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 CLEC4CQ8WTT0 213 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 SEC14L1Q92503 715 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 TRMT2BQ96GJ1 504 aaKnown RBP9.46□□□□□ -0.9
NR1I3-230ENST00000511944 PKNOX2Q96KN3 472 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 VN1R3Q9BXE9 311 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 RAB17Q9H0T7 212 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 SMOC2Q9H3U7 446 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 ANKZF1Q9H8Y5 726 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 NGRNQ9NPE2 291 aaKnown RBP9.46□□□□□ -0.9
NR1I3-230ENST00000511944 MRPL17Q9NRX2 175 aaKnown RBP9.46□□□□□ -0.9
NR1I3-230ENST00000511944 RASAL2Q9UJF2 1139 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 DYRK1BQ9Y463 629 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 NR2E3Q9Y5X4 410 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 CDY1Q9Y6F8 540 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 VWA8A3KMH1 1905 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 ALPK3Q96L96 1907 aa9.46□□□□□ -0.9
NR1I3-230ENST00000511944 WDR27A2RRH5 827 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 NT5C1B-RDH14C9J2C7 533 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 APOC4-APOC2K7ER74 178 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 TERTO14746 1132 aaKnown RBP9.45□□□□□ -0.9
NR1I3-230ENST00000511944 FGF18O76093 207 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 APOC2P02655 101 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 FYNP06241 537 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 USP17L7P0C7H9 530 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 CSH1P0DML2 217 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 CSH2P0DML3 217 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 RARAP10276 462 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 RALAP11233 206 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 TGM2P21980 687 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 YWHAQP27348 245 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 MSX1P28360 303 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 HCAR3P49019 387 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 CXCR3P49682 368 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 SULT1E1P49888 294 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 TUBP50607 506 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 KPNA1P52294 538 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-230ENST00000511944 YWHAGP61981 247 aaKnown RBP eCLIP9.45□□□□□ -0.9
NR1I3-230ENST00000511944 DEUP1Q05D60 604 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 C2orf54Q08AI8 447 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 ZNF211Q13398 564 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-230ENST00000511944 PPP2R5DQ14738 602 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 OCLNQ16625 522 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 PTPROQ16827 1216 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 C15orf59Q2T9L4 293 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-230ENST00000511944 SNX30Q5VWJ9 437 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 BSPRYQ5W0U4 402 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 KLHDC10Q6PID8 442 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 CPNE8Q86YQ8 564 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 IFT20Q8IY31 132 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 TCEAL8Q8IYN2 117 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 KCTD6Q8NC69 237 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 NKD2Q969F2 451 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-230ENST00000511944 MYRFLQ96LU7 910 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 SERPINB11Q96P15 392 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 GAS2L1Q99501 681 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-230ENST00000511944 CLSTN3Q9BQT9 956 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 ZBP1Q9H171 429 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 TLR8Q9NR97 1041 aaKnown RBP9.45□□□□□ -0.9
NR1I3-230ENST00000511944 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.45□□□□□ -0.9
NR1I3-230ENST00000511944 UXTQ9UBK9 157 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-230ENST00000511944 AP4E1Q9UPM8 1137 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 DRG1Q9Y295 367 aaKnown RBP9.45□□□□□ -0.9
NR1I3-230ENST00000511944 ASB3Q9Y575 518 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 RAD54BQ9Y620 910 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 CLUHO75153 1309 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 PLXNA3P51805 1871 aa9.45□□□□□ -0.9
NR1I3-230ENST00000511944 H3BM21 787 aa9.44□□□□□ -0.9
NR1I3-230ENST00000511944 IRAK2O43187 625 aa9.44□□□□□ -0.9
NR1I3-230ENST00000511944 ATP8B1O43520 1251 aa9.44□□□□□ -0.9
NR1I3-230ENST00000511944 PRMT3O60678 531 aa9.44□□□□□ -0.9
NR1I3-230ENST00000511944 GRAP2O75791 330 aa9.44□□□□□ -0.9
NR1I3-230ENST00000511944 VNN2O95498 520 aa9.44□□□□□ -0.9
NR1I3-230ENST00000511944 GAS8O95995 478 aa9.44□□□□□ -0.9
NR1I3-230ENST00000511944 OR4Q2P0C623 313 aa9.44□□□□□ -0.9
NR1I3-230ENST00000511944 ZDHHC11BP0C7U3 371 aa9.44□□□□□ -0.9
NR1I3-230ENST00000511944 NCAM1P13591 858 aa9.44□□□□□ -0.9
NR1I3-230ENST00000511944 OR1D2P34982 312 aa9.44□□□□□ -0.9
NR1I3-230ENST00000511944 BMPR1AP36894 532 aa9.44□□□□□ -0.9
NR1I3-230ENST00000511944 COILP38432 576 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-230ENST00000511944 PBX3P40426 434 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms