RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 TMCO2Q7Z6W1 182 aaPredicted RBP15.75■□□□□ 0.11
SCLT1-209ENST00000511426 TCEAL8Q8IYN2 117 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 RNF34Q969K3 372 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 RTP4Q96DX8 246 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 C1orf74Q96LT6 269 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 PHACTR1Q9C0D0 580 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 DPH5Q9H2P9 285 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 ARHGEF4Q9NR80 690 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 GMIPQ9P107 970 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 SLC27A5Q9Y2P5 690 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 SNX24Q9Y343 169 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 ALPK3Q96L96 1907 aa15.75■□□□□ 0.11
SCLT1-209ENST00000511426 SGK1O00141 431 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 ADAM12O43184 909 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 PECAM1P16284 738 aaPredicted RBP15.74■□□□□ 0.11
SCLT1-209ENST00000511426 IVDP26440 423 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 HSPA9P38646 679 aaKnown RBP15.74■□□□□ 0.11
SCLT1-209ENST00000511426 ADCY8P40145 1251 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 CDR1P51861 262 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 TPI1P60174 286 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 USP46P62068 366 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 TAF10Q12962 218 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 DPYSQ14117 519 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 SLMAPQ14BN4 828 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 RASIP1Q5U651 963 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 NCBP2-AS2Q69YL0 99 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 SLC39A13Q96H72 371 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 TRIM31Q9BZY9 425 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 SLC12A6Q9UHW9 1150 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 YIPF1Q9Y548 306 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 ASB3Q9Y575 518 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 CLUHO75153 1309 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 PTPRSQ13332 1948 aa15.74■□□□□ 0.11
SCLT1-209ENST00000511426 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.73■□□□□ 0.11
SCLT1-209ENST00000511426 SYNJ2BP-COX16A0A087WUM0 186 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 C2CD2LO14523 706 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 FGF10O15520 208 aaPredicted RBP15.73■□□□□ 0.11
SCLT1-209ENST00000511426 TLL1O43897 1013 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 RARGP13631 454 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 GOT1P17174 413 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 HOXC13P31276 330 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 ACTN2P35609 894 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 TRIP4Q15650 581 aaPredicted RBP15.73■□□□□ 0.11
SCLT1-209ENST00000511426 ALS2CLQ60I27 953 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 ZDHHC24Q6UX98 284 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 ITIH5Q86UX2 942 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 GSPT2Q8IYD1 628 aaKnown RBP15.73■□□□□ 0.11
SCLT1-209ENST00000511426 STKLD1Q8NE28 680 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 ADAM32Q8TC27 787 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 CASP10Q92851 521 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 TMEM121Q9BTD3 319 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 PLEKHA4Q9H4M7 779 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 COX16Q9P0S2 106 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 OR12D3Q9UGF7 316 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 HBS1LQ9Y450 684 aaKnown RBP15.73■□□□□ 0.11
SCLT1-209ENST00000511426 KCNU1A8MYU2 1149 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 C5orf67F2Z3F1 127 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 PPP1R12AO14974 1030 aaPredicted RBP15.73■□□□□ 0.11
SCLT1-209ENST00000511426 DCLK1O15075 740 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 APOEP02649 317 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 RB1P06400 928 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 ADH1AP07327 375 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 BMPR1AP36894 532 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 PLTPP55058 493 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 ZNF33AQ06730 810 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 MORF4L2Q15014 288 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 P3H1Q32P28 736 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 SLC45A4Q5BKX6 768 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 SDHAF4Q5VUM1 108 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 DARS2Q6PI48 645 aaKnown RBP15.73■□□□□ 0.11
SCLT1-209ENST00000511426 HOOK3Q86VS8 718 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 DDX42Q86XP3 938 aaKnown RBP eCLIP15.73■□□□□ 0.11
SCLT1-209ENST00000511426 LZTR1Q8N653 840 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 FBXO25Q8TCJ0 367 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 SAMD11Q96NU1 681 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 OLFM3Q96PB7 478 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 EMILIN2Q9BXX0 1053 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 RETREG1Q9H6L5 497 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 CYP4F11Q9HBI6 524 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 OSER1Q9NX31 292 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 CXXC1Q9P0U4 656 aaPredicted RBP15.73■□□□□ 0.11
SCLT1-209ENST00000511426 SHOC2Q9UQ13 582 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 MYO16Q9Y6X6 1858 aa15.73■□□□□ 0.11
SCLT1-209ENST00000511426 H7C0C1 242 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 DNALI1O14645 258 aaPredicted RBP15.72■□□□□ 0.11
SCLT1-209ENST00000511426 MTSS1O43312 755 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 PPFIA2O75334 1257 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 IGLV3-27P01718 113 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 RPL17P18621 184 aaKnown RBP15.72■□□□□ 0.11
SCLT1-209ENST00000511426 MX2P20592 715 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 ATP5OP48047 213 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 EPHB3P54753 998 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 TBX4P57082 545 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 PDK1Q15118 436 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 TRADDQ15628 312 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 CFAP58Q5T655 872 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 RHBDF2Q6PJF5 856 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 CCDC149Q6ZUS6 474 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 TMC3Q7Z5M5 1100 aa15.72■□□□□ 0.11
SCLT1-209ENST00000511426 ATP6V0D2Q8N8Y2 350 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms