RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 POU4F2Q12837 409 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 CRY1Q16526 586 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 LPAL2Q16609 132 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 ZNF394Q53GI3 561 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 C2orf27AQ580R0 203 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 C10orf120Q5SQS8 335 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 BTBD8Q5XKL5 378 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 CEP68Q76N32 757 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 LYSMD3Q7Z3D4 306 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 C12orf40Q86WS4 652 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 TRIM59Q8IWR1 403 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 SCML4Q8N228 414 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 TRIML1Q8N9V2 468 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 IL17RCQ8NAC3 791 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 NELFBQ8WX92 580 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 CNOT6LQ96LI5 555 aaKnown RBP8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 ARHGEF4Q9NR80 690 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 POLR3BQ9NW08 1133 aaPredicted RBP8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 DEC1Q9P2X7 70 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 NAGPAQ9UK23 515 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 ZNF510Q9Y2H8 683 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 PCDHGA5Q9Y5G8 931 aa8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 MAP1BP46821 2468 aaKnown RBP8.35□□□□□ -1.07
UBE2D3-222ENST00000508238 TBC1D3BA6NDS4 549 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 O00370 1275 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 XPO1O14980 1071 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 CACNG3O60359 315 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 STC2O76061 302 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 EPN2O95208 641 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 ZBED1O96006 694 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 KLKB1P03952 638 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 CCDC192P0DO97 292 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 SCNN1AP37088 669 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 TKTL1P51854 596 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 BCAT1P54687 386 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 UBE2HP62256 183 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 GCNT1Q02742 428 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 SPEM2Q0P670 501 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 CNGA2Q16280 664 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 RSPO4Q2I0M5 234 aaPredicted RBP8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 PLK5Q496M5 336 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 SGO2Q562F6 1265 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 EOGTQ5NDL2 527 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 ISM2Q6H9L7 571 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 LCLAT1Q6UWP7 414 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 KBTBD6Q86V97 674 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 C11orf74Q86VG3 221 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 TTC30AQ86WT1 665 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 SFTPA1Q8IWL2 248 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 TSTD1Q8NFU3 115 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 OLIG1Q8TAK6 271 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 RHBDD1Q8TEB9 315 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 KCTD13Q8WZ19 329 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 JAKMIP2Q96AA8 810 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 NT5C1BQ96P26 610 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 HHIPQ96QV1 700 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 DCLK3Q9C098 648 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 SEMA4GQ9NTN9 838 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 HESX1Q9UBX0 185 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 LSM7Q9UK45 103 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 FBXO10Q9UK96 956 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 TSPAN16Q9UKR8 245 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 CNTN6Q9UQ52 1028 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 PLXND1Q9Y4D7 1925 aa8.34□□□□□ -1.07
UBE2D3-222ENST00000508238 ANTXRLA6NF34 631 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 SGK1O00141 431 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 ADAM23O75077 832 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 ALDH1A2O94788 518 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 RHOBTB1O94844 696 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 FGFR1OPO95684 399 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 PENKP01210 267 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 CISD3P0C7P0 127 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 ZNF806P0C7X5 589 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 SETSIPP0DME0 302 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 TYRP14679 529 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 HNRNPLP14866 589 aaKnown RBP eCLIP8.33□□□□□ -1.084e-9■■■■■ 29.5
UBE2D3-222ENST00000508238 RHOQP17081 205 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 CHKAP35790 457 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 ZNF132P52740 706 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 ATXN1P54253 815 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 PSMA6P60900 246 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 YWHAGP61981 247 aaKnown RBP eCLIP8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 BST2Q10589 180 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 LRMPQ12912 555 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 PAK1Q13153 545 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 STILQ15468 1287 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 TEAD4Q15561 434 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 GOLGA7BQ2TAP0 167 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 ANO4Q32M45 955 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 CCDC40Q4G0X9 1142 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 C4orf17Q53FE4 359 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 USP39Q53GS9 565 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 EMC10Q5UCC4 262 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 KLHL10Q6JEL2 608 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 TMEM270Q6UE05 265 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 PRR23CQ6ZRP0 262 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 BHLHA9Q7RTU4 235 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 DGLUCYQ7Z3D6 616 aa8.33□□□□□ -1.08
UBE2D3-222ENST00000508238 TRMT11Q7Z4G4 463 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms