RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 DKC1O60832 514 aaKnown RBP eCLIP3.55□□□□□ -1.84
TCOF1-208ENST00000506063 CNTN5O94779 1100 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 MAP3K6O95382 1288 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 PENKP01210 267 aaPredicted RBP3.55□□□□□ -1.84
TCOF1-208ENST00000506063 EPHX1P07099 455 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 ADRB2P07550 413 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 CXCL8P10145 99 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 MCF2P10911 925 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 LIG1P18858 919 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 KLK2P20151 261 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 CD82P27701 267 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 LIFRP42702 1097 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 NAMPTP43490 491 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 PGFP49763 221 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 MFAP1P55081 439 aaKnown RBP3.55□□□□□ -1.84
TCOF1-208ENST00000506063 ZBTB16Q05516 673 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 ZFP36L1Q07352 338 aaKnown RBP3.55□□□□□ -1.84
TCOF1-208ENST00000506063 PDIA5Q14554 519 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 NOLC1Q14978 699 aaKnown RBP eCLIP3.55□□□□□ -1.84
TCOF1-208ENST00000506063 NR6A1Q15406 480 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 NPY5RQ15761 445 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 ZNF568Q3ZCX4 644 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 ZRANB3Q5FWF4 1079 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 NAPEPLDQ6IQ20 393 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 MOXD1Q6UVY6 613 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 CWC27Q6UX04 472 aaKnown RBP3.55□□□□□ -1.84
TCOF1-208ENST00000506063 USP30Q70CQ3 517 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 MAEAQ7L5Y9 396 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 TAOK1Q7L7X3 1001 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 DDX42Q86XP3 938 aaKnown RBP eCLIP3.55□□□□□ -1.84
TCOF1-208ENST00000506063 ZC3H3Q8IXZ2 948 aaKnown RBP3.55□□□□□ -1.84
TCOF1-208ENST00000506063 CCDC13Q8IYE1 715 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 ZNF366Q8N895 744 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 RDH13Q8NBN7 331 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 TMEM145Q8NBT3 493 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 TPCN2Q8NHX9 752 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 NCOA7Q8NI08 942 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 TBCKQ8TEA7 893 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 USP7Q93009 1102 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 FAM131CQ96AQ9 280 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 SKA1Q96BD8 255 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 C19orf60Q96EN9 201 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 ZBTB45Q96K62 511 aaPredicted RBP3.55□□□□□ -1.84
TCOF1-208ENST00000506063 SPATA17Q96L03 361 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 SMR3AQ99954 134 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 MTA3Q9BTC8 594 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 BBS2Q9BXC9 721 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 B3GNT4Q9C0J1 378 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 CDH19Q9H159 772 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 NEUROG2Q9H2A3 272 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 CXXC4Q9H2H0 198 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 PABPC3Q9H361 631 aaKnown RBP3.55□□□□□ -1.84
TCOF1-208ENST00000506063 SEMA6CQ9H3T2 930 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 TTC12Q9H892 705 aaPredicted RBP3.55□□□□□ -1.84
TCOF1-208ENST00000506063 PRSS16Q9NQE7 514 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 KLHL11Q9NVR0 708 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 PLK2Q9NYY3 685 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 ADAM21Q9UKJ8 722 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 DDX19BQ9UMR2 479 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 CA5BQ9Y2D0 317 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 LOXL2Q9Y4K0 774 aa3.55□□□□□ -1.84
TCOF1-208ENST00000506063 SONP18583 2426 aaKnown RBP3.55□□□□□ -1.84
TCOF1-208ENST00000506063 CHD3Q12873 2000 aaKnown RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 RYR3Q15413 4870 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 CPED1A4D0V7 1026 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 FAM47DPA6NHR8 397 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 H3BM21 787 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 ZG16O60844 167 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 SNRPB2P08579 225 aaKnown RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 FURINP09958 794 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 PRKAR1AP10644 381 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 MBL2P11226 248 aaPredicted RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 MS4A1P11836 297 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 BPIP17213 487 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 CAPN3P20807 821 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 CDC27P30260 824 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 UGT1A3P35503 534 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 MAGEA11P43364 429 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 ART1P52961 327 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 ADPRHP54922 357 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 CDH8P55286 799 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 NOP14P78316 857 aaKnown RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 RAD51AP2Q09MP3 1159 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 KCNMA1Q12791 1236 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 OVGP1Q12889 678 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 FOXD4Q12950 439 aaPredicted RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 TRDNQ13061 729 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 ADAM9Q13443 819 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 SPIDRQ14159 915 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 NFE2Q16621 373 aaPredicted RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 TMEM132AQ24JP5 1023 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 DEFB109BQ30KR1 87 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 CRTC2Q53ET0 693 aaPredicted RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 INTS6LQ5JSJ4 861 aaKnown RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 FYB2Q5VWT5 728 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 SPATA1Q5VX52 437 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 C9orf57Q5W0N0 161 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 TMEM198Q66K66 360 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 SCARA3Q6AZY7 606 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 ZCCHC8Q6NZY4 707 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms