RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 CXCL10P02778 98 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 CTSHP09668 335 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 ITGB8P26012 769 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 RFC2P35250 354 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 MARSP56192 900 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 BPIFB3P59826 476 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 PPARDQ03181 441 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 MBTD1Q05BQ5 628 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 ZNF844Q08AG5 666 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 NR1I3Q14994 352 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 FAM187BQ17R55 369 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 FBXO47Q5MNV8 452 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 TTC39BQ5VTQ0 682 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 PPP4R3CPQ6ZMV5 832 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 ZNF720Q7Z2F6 126 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 HEATR4Q86WZ0 1026 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 KBTBD2Q8IY47 623 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 FAM9CQ8IZT9 166 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 MYCT1Q8N699 235 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 TTLQ8NG68 377 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 ATXN2LQ8WWM7 1075 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 NLRP7Q8WX94 980 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 SH3KBP1Q96B97 665 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 OSMRQ99650 979 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 GCOM2Q9BZD3 368 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 ZHX3Q9H4I2 956 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 DENND2DQ9H6A0 471 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 TMEM134Q9H6X4 195 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 RUBCNLQ9H714 662 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 WDR6Q9NNW5 1121 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 MAN1C1Q9NR34 630 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 NOVA2Q9UNW9 492 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 UTP11Q9Y3A2 253 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 ANO9A1A5B4 782 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 LRRIQ4A6NIV6 560 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 ZBTB11O95625 1053 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 HNF1BP35680 557 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 SLC26A3P40879 764 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 EFNA5P52803 228 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 GTF2BQ00403 316 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 ALCAMQ13740 583 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 NPTX1Q15818 432 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 AMHR2Q16671 573 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 BMT2Q1RMZ1 405 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 TIGD2Q4W5G0 525 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 ANKRD39Q53RE8 183 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 FAM26FQ5R3K3 315 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 CLVS2Q5SYC1 327 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 MFSD5Q6N075 450 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 FAM47EQ6ZV65 393 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 EPM2AIP1Q7L775 607 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 TAS1R3Q7RTX0 852 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 CREG2Q8IUH2 290 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 FAM178BQ8IXR5 827 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 C7orf61Q8IZ16 206 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 FITM2Q8N6M3 262 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 RNF169Q8NCN4 708 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 KIAA0895Q8NCT3 520 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 SPATA4Q8NEY3 305 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 INPP5DQ92835 1189 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 ARHGEF2Q92974 986 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 VWCEQ96DN2 955 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 KIFC3Q9BVG8 833 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 FGFBP2Q9BYJ0 223 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 GRIP2Q9C0E4 1043 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 FZD8Q9H461 694 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 HAUS4Q9H6D7 363 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 MINDY3Q9H8M7 445 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 TXLNGQ9NUQ3 528 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 GGT7Q9UJ14 662 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 NFU1Q9UMS0 254 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 ANGPTL3Q9Y5C1 460 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 EIF3DO15371 548 aaKnown RBP eCLIP9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 SLC16A4O15374 487 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 EXTL3O43909 919 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 KLHL41O60662 606 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 RNASEH1O60930 286 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 NBNO60934 754 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 ENTPD5O75356 428 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 SUN1O94901 812 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 GSTM1P09488 218 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 SRGAP2CP0DJJ0 459 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 PCSK6P29122 969 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 CRABP2P29373 138 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 CYP2C18P33260 490 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 PRKCIP41743 596 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 CARSP49589 748 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 NEK3P51956 506 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 MAGOHP61326 146 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 TMPRSS15P98073 1019 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 IFITM2Q01629 132 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 CD300CQ08708 224 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 TRAP1Q12931 704 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 DSC3Q14574 896 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 HAUS6Q7Z4H7 955 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 ZBTB8OSQ8IWT0 167 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 NELFCDQ8IXH7 590 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 MDM1Q8TC05 714 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 ACTRT2Q8TDY3 377 aa9.91□□□□□ -0.82
PDLIM5-207ENST00000503974 NELL1Q92832 810 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms