RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 POTEHQ6S545 545 aa20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 NT5DC3Q86UY8 548 aa20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 CPXM2Q8N436 756 aa20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 ATXN2LQ8WWM7 1075 aaKnown RBP20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 ATRIPQ8WXE1 791 aa20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 DDX56Q9NY93 547 aaKnown RBP20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 RCOR3Q9P2K3 495 aaPredicted RBP20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 THEGQ9P2T0 379 aa20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 AMFRQ9UKV5 643 aa20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 CAPN6Q9Y6Q1 641 aa20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 FAM170AA1A519 330 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 PALMO75781 387 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 COMTP21964 271 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 FCARP24071 287 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 CHKAP35790 457 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 HCAR3P49019 387 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 ZXDBP98169 803 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 FCHO2Q0JRZ9 810 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 CDO1Q16878 200 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 C5orf22Q49AR2 442 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 ZC3H12AQ5D1E8 599 aaKnown RBP20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 SH3PXD2AQ5TCZ1 1133 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 PTCRAQ6ISU1 281 aaPredicted RBP20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 PEX26Q7Z412 305 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 MFSD6LQ8IWD5 586 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 SH3RF2Q8TEC5 729 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 ING5Q8WYH8 240 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 BTBD6Q96KE9 485 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 THG1LQ9NWX6 298 aaKnown RBP20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 TRMT1Q9NXH9 659 aaKnown RBP20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 IGSF9Q9P2J2 1179 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 FZD10Q9ULW2 581 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 SH3BP1Q9Y3L3 701 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 JRKLQ9Y4A0 524 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 PCDHA3Q9Y5H8 950 aa20.48■□□□□ 0.87
SCAMP3-209ENST00000497470 HELZP42694 1942 aaKnown RBP20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 KIF2AO00139 706 aaPredicted RBP20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 MSI1O43347 362 aaKnown RBP20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 SPOPO43791 374 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 ACSL4O60488 711 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 L1CAMP32004 1257 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 GBP2P32456 591 aaPredicted RBP20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 CTNNA1P35221 906 aaKnown RBP20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 DEKP35659 375 aaKnown RBP20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 PDK2Q15119 407 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 DPYSL2Q16555 572 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 MPP7Q5T2T1 576 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 ADGRF1Q5T601 910 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 CYP4V2Q6ZWL3 525 aaPredicted RBP20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 FAM131BQ86XD5 332 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 TDRD5Q8NAT2 981 aaKnown RBP20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 ADAM32Q8TC27 787 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 BPIFB1Q8TDL5 484 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 PPM1EQ8WY54 764 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 RNF34Q969K3 372 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 HES6Q96HZ4 224 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 TKTL2Q9H0I9 626 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 GKN1Q9NS71 199 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 DONSONQ9NYP3 566 aa20.47■□□□□ 0.87
SCAMP3-209ENST00000497470 USP27XA6NNY8 438 aa20.46■□□□□ 0.87
SCAMP3-209ENST00000497470 GFRA2O00451 464 aa20.46■□□□□ 0.87
SCAMP3-209ENST00000497470 PRAMEF12O95522 483 aa20.46■□□□□ 0.87
SCAMP3-209ENST00000497470 KLKB1P03952 638 aa20.46■□□□□ 0.87
SCAMP3-209ENST00000497470 CLUL1Q15846 466 aa20.46■□□□□ 0.87
SCAMP3-209ENST00000497470 EFHC2Q5JST6 749 aa20.46■□□□□ 0.87
SCAMP3-209ENST00000497470 MEI1Q5TIA1 1274 aa20.46■□□□□ 0.87
SCAMP3-209ENST00000497470 MAP7D3Q8IWC1 876 aa20.46■□□□□ 0.87
SCAMP3-209ENST00000497470 KATNAL2Q8IYT4 538 aa20.46■□□□□ 0.87
SCAMP3-209ENST00000497470 TRPV5Q9NQA5 729 aa20.46■□□□□ 0.87
SCAMP3-209ENST00000497470 CFAP97Q9P2B7 532 aa20.46■□□□□ 0.87
SCAMP3-209ENST00000497470 CDH22Q9UJ99 828 aa20.46■□□□□ 0.87
SCAMP3-209ENST00000497470 CORO1AP31146 461 aaKnown RBP20.45■□□□□ 0.86
SCAMP3-209ENST00000497470 KCNQ1P51787 676 aa20.45■□□□□ 0.86
SCAMP3-209ENST00000497470 COPS2P61201 443 aa20.45■□□□□ 0.86
SCAMP3-209ENST00000497470 SEMA3BQ13214 749 aa20.45■□□□□ 0.86
SCAMP3-209ENST00000497470 PDGFRLQ15198 375 aa20.45■□□□□ 0.86
SCAMP3-209ENST00000497470 TTC39BQ5VTQ0 682 aaPredicted RBP20.45■□□□□ 0.86
SCAMP3-209ENST00000497470 UBL4BQ8N7F7 174 aa20.45■□□□□ 0.86
SCAMP3-209ENST00000497470 ZNF557Q8N988 423 aaPredicted RBP20.45■□□□□ 0.86
SCAMP3-209ENST00000497470 PRMT1Q99873 361 aaKnown RBP20.45■□□□□ 0.86
SCAMP3-209ENST00000497470 PPARGC1AQ9UBK2 798 aaKnown RBP20.45■□□□□ 0.86
SCAMP3-209ENST00000497470 AGO1Q9UL18 857 aaKnown RBP20.45■□□□□ 0.86
SCAMP3-209ENST00000497470 EFR3BQ9Y2G0 817 aa20.45■□□□□ 0.86
SCAMP3-209ENST00000497470 IGLV3-10A0A075B6K4 115 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 HEPACAM2A8MVW5 462 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 LOC730098B7Z3J9 87 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 CHADO15335 359 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 PAGE1O75459 146 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 RARAP10276 462 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 PSMC3P17980 439 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 IL1R2P27930 398 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 HOXC13P31276 330 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 PEX5P50542 639 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 TAS2R40P59535 323 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 ETF1P62495 437 aaKnown RBP20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 HTR4Q13639 388 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 MANEALQ5VSG8 457 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 RNF43Q68DV7 783 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 SCYL2Q6P3W7 929 aa20.44■□□□□ 0.86
SCAMP3-209ENST00000497470 NYAP1Q6ZVC0 841 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms