RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 TRIM71Q2Q1W2 868 aaKnown RBP4.87□□□□□ -1.63
TRIM4-205ENST00000496896 FAM209BQ5JX69 171 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 CCDC181Q5TID7 509 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 IZUMO3Q5VZ72 239 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 PIK3AP1Q6ZUJ8 805 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 TFAP2DQ7Z6R9 452 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 UEVLDQ8IX04 471 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 LAS2Q8IYD9 372 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 OR2C3Q8N628 320 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 GLIS1Q8NBF1 620 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 ASB12Q8WXK4 309 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 PIGKQ92643 395 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 GJA10Q969M2 543 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 PAAF1Q9BRP4 392 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 CDCP1Q9H5V8 836 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 KCNK9Q9NPC2 374 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 HELLSQ9NRZ9 838 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 GJB4Q9NTQ9 266 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 HEY2Q9UBP5 337 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 HEMK1Q9Y5R4 338 aaPredicted RBP4.87□□□□□ -1.63
TRIM4-205ENST00000496896 TOP2AP11388 1531 aaKnown RBP4.87□□□□□ -1.63
TRIM4-205ENST00000496896 CCDC187A0A096LP49 1063 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 CTIFO43310 598 aaKnown RBP4.86□□□□□ -1.63
TRIM4-205ENST00000496896 NTN1O95631 604 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 PECAM1P16284 738 aaPredicted RBP4.86□□□□□ -1.63
TRIM4-205ENST00000496896 TFEBP19484 476 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 EEF1GP26641 437 aaKnown RBP4.86□□□□□ -1.63
TRIM4-205ENST00000496896 GSTM5P46439 218 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 CPA2P48052 419 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 POLGP54098 1239 aaPredicted RBP4.86□□□□□ -1.63
TRIM4-205ENST00000496896 BFSP2Q13515 415 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 HSP90AB2PQ58FF8 381 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 FAM57BQ71RH2 274 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 IRF2BP2Q7Z5L9 587 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 RFX6Q8HWS3 928 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.86□□□□□ -1.63
TRIM4-205ENST00000496896 TXLNBQ8N3L3 684 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 MLXIPLQ9NP71 852 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 POT1Q9NUX5 634 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 ASNSD1Q9NWL6 643 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 UBE2J1Q9Y385 318 aaPredicted RBP4.86□□□□□ -1.63
TRIM4-205ENST00000496896 DTNAQ9Y4J8 743 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.86□□□□□ -1.63
TRIM4-205ENST00000496896 PCDHB2Q9Y5E7 798 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 HS3ST3B1Q9Y662 390 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 ZNF335Q9H4Z2 1342 aaPredicted RBP4.86□□□□□ -1.63
TRIM4-205ENST00000496896 MROH2BQ7Z745 1585 aa4.86□□□□□ -1.63
TRIM4-205ENST00000496896 FAM234BA2RU67 622 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 FAM90A10PA6NDY2 464 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 INSIG1O15503 277 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 TLX3O43711 291 aaPredicted RBP4.85□□□□□ -1.63
TRIM4-205ENST00000496896 OAZ2O95190 189 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 ENO1P06733 434 aaKnown RBP4.85□□□□□ -1.63
TRIM4-205ENST00000496896 HARSP12081 509 aaKnown RBP4.85□□□□□ -1.63
TRIM4-205ENST00000496896 HOXB6P17509 224 aaKnown RBP4.85□□□□□ -1.63
TRIM4-205ENST00000496896 YY1P25490 414 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 SLC8A1P32418 973 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 SOX2P48431 317 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 AK2P54819 239 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 DMWDQ09019 674 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 GAB1Q13480 694 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 MTX1Q13505 466 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 CBFBQ13951 182 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 KYAT3Q6YP21 454 aaKnown RBP4.85□□□□□ -1.63
TRIM4-205ENST00000496896 TTC30AQ86WT1 665 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 RASGRP3Q8IV61 690 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 CELF1Q92879 486 aaKnown RBP4.85□□□□□ -1.63
TRIM4-205ENST00000496896 TRMT61AQ96FX7 289 aaKnown RBP4.85□□□□□ -1.63
TRIM4-205ENST00000496896 RIPOR3Q96MK2 946 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 EIF3CQ99613 913 aaKnown RBP4.85□□□□□ -1.63
TRIM4-205ENST00000496896 TUBB6Q9BUF5 446 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 TTLL2Q9BWV7 592 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.85□□□□□ -1.63
TRIM4-205ENST00000496896 PAPOLBQ9NRJ5 636 aaKnown RBP4.85□□□□□ -1.63
TRIM4-205ENST00000496896 VPS4AQ9UN37 437 aa4.85□□□□□ -1.63
TRIM4-205ENST00000496896 TTBK1Q5TCY1 1321 aaPredicted RBP4.85□□□□□ -1.63
TRIM4-205ENST00000496896 EMSYQ7Z589 1322 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 SLC22A23A1A5C7 686 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 F8W810 466 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 NPC1O15118 1278 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 NCK2O43639 380 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 TULP3O75386 442 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 NTSR2O95665 410 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 KRT18P05783 430 aaKnown RBP4.84□□□□□ -1.63
TRIM4-205ENST00000496896 NBPF7P0C2Y1 421 aaPredicted RBP4.84□□□□□ -1.63
TRIM4-205ENST00000496896 VPS41P49754 854 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 MTA1Q13330 715 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 CSHL1Q14406 222 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 ELF2Q15723 593 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 ZNF260Q3ZCT1 412 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 LEXMQ3ZCV2 418 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 ARHGAP15Q53QZ3 475 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 CCSAPQ6IQ19 270 aaPredicted RBP4.84□□□□□ -1.63
TRIM4-205ENST00000496896 FBXO38Q6PIJ6 1188 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 NSMCE1Q8WV22 266 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 ZNF566Q969W8 418 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 WACQ9BTA9 647 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 FOXP1Q9H334 677 aaPredicted RBP4.84□□□□□ -1.63
TRIM4-205ENST00000496896 TMEM45AQ9NWC5 275 aa4.84□□□□□ -1.63
TRIM4-205ENST00000496896 PRPF4O43172 522 aaKnown RBP eCLIP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms