RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 UXTQ9UBK9 157 aaPredicted RBP10.64□□□□□ -0.71
RAB11FIP3-211ENST00000495663 FOXD3Q9UJU5 478 aaPredicted RBP10.64□□□□□ -0.71
RAB11FIP3-211ENST00000495663 BZW2Q9Y6E2 419 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP3-211ENST00000495663 UNC80Q8N2C7 3258 aa10.64□□□□□ -0.71
RAB11FIP3-211ENST00000495663 DOCK6Q96HP0 2047 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ANAPC1Q9H1A4 1944 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 HHLA1C9JL84 531 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 H3BQ06 376 aaPredicted RBP10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 FGF19O95750 216 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SERPING1P05155 500 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 HNRNPH3P31942 346 aaKnown RBP10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 MTHFRP42898 656 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SLC5A3P53794 718 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ADKP55263 362 aaKnown RBP10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 FMO1Q01740 532 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 IFRD2Q12894 506 aaPredicted RBP10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CLUL1Q15846 466 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ATAT1Q5SQI0 421 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CYP4A22Q5TCH4 519 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 E4F1Q66K89 784 aaPredicted RBP10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TRIM72Q6ZMU5 477 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 GRASPQ7Z6J2 395 aaPredicted RBP10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PASD1Q8IV76 773 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 LEMD2Q8NC56 503 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SMRP1Q8NCR6 262 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TMEM35BQ8NCS4 154 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 STKLD1Q8NE28 680 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SLC20A1Q8WUM9 679 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 KCTD13Q8WZ19 329 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TRMT2BQ96GJ1 504 aaKnown RBP10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 HSFY1Q96LI6 401 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 NOX5Q96PH1 765 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 AGPAT1Q99943 283 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 S1PR5Q9H228 398 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 FBXO44Q9H4M3 255 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 HAUS4Q9H6D7 363 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 LRRC4Q9HBW1 653 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ASAH2Q9NR71 780 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SEPT11Q9NVA2 429 aaKnown RBP10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 HCFC1R1Q9NWW0 138 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 COMMD8Q9NX08 183 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 DNMT3BQ9UBC3 853 aaKnown RBP10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 MAGED2Q9UNF1 606 aaPredicted RBP10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 NOTCH4Q99466 2003 aa10.63□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TULP2O00295 520 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ZNF197O14709 1029 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TNFRSF21O75509 655 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 LSM8O95777 96 aaKnown RBP10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 RHOP08100 348 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SKILP12757 684 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 MYL4P12829 197 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 HMGA1P17096 107 aaKnown RBP10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CHRNB2P17787 502 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TNFAIP3P21580 790 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 YWHAQP27348 245 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CDH5P33151 784 aaPredicted RBP10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ACADSBP45954 432 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 RGS7P49802 495 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 EPHA5P54756 1037 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SNX16P57768 344 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 GOLGA8FQ08AF8 430 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 GOLGA8DPQ0D2H9 430 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 C19orf57Q0VDD7 668 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PDCLQ13371 301 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SMAD4Q13485 552 aaKnown RBP10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PABPC1LQ4VXU2 614 aaKnown RBP10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 RAB41Q5JT25 222 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 RNF43Q68DV7 783 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ANKRD34AQ69YU3 496 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PMF1Q6P1K2 205 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 FDX2Q6P4F2 183 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PDZD4Q76G19 769 aaPredicted RBP10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 GPRIN1Q7Z2K8 1008 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 VPS36Q86VN1 386 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TMC8Q8IU68 726 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SIX6OS1Q8N1H7 587 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TMEM102Q8N9M5 508 aaPredicted RBP10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TC2NQ8N9U0 490 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SPC24Q8NBT2 197 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 MSANTD4Q8NCY6 345 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 C1orf131Q8NDD1 294 aaKnown RBP10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SCAMP5Q8TAC9 235 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PMEPA1Q969W9 287 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 NECTIN4Q96NY8 510 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 SLITRK1Q96PX8 696 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 GCNAQ96QF7 691 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TTLL2Q9BWV7 592 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ST7Q9NRC1 585 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 LATS2Q9NRM7 1088 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 XIRP2A4UGR9 3374 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 PRUNE2Q8WUY3 3088 aa10.62□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CLUHO75153 1309 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 MBTPS2O43462 519 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CYP1A1P04798 512 aaPredicted RBP10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 LCP1P13796 627 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 GABRR2P28476 465 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 CDC25CP30307 473 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 ARL4DP49703 201 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 TKTL1P51854 596 aa10.61□□□□□ -0.71
RAB11FIP3-211ENST00000495663 KIF11P52732 1056 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms