RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 TRABD2BA6NFA1 517 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 TNFSF14O43557 240 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 CALUO43852 315 aaPredicted RBP18.37■□□□□ 0.53
TMEM53-209ENST00000495630 CD58P19256 250 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 ME1P48163 572 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 ENPEPQ07075 957 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 PDE4CQ08493 712 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 KIF19Q2TAC6 998 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 MPPE1Q53F39 396 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 RSRC2Q7L4I2 434 aaKnown RBP18.37■□□□□ 0.53
TMEM53-209ENST00000495630 FAM124AQ86V42 546 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 CCDC150Q8NCX0 1101 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 PLD4Q96BZ4 506 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 PAGE5Q96GU1 130 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 TMEM245Q9H330 911 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 SERTAD1Q9UHV2 236 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 ANKRD6Q9Y2G4 727 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.37■□□□□ 0.53
TMEM53-209ENST00000495630 SNX11Q9Y5W9 270 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 MYH10P35580 1976 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 URB1O60287 2271 aaKnown RBP18.37■□□□□ 0.53
TMEM53-209ENST00000495630 APC2O95996 2303 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 KNL1Q8NG31 2342 aa18.37■□□□□ 0.53
TMEM53-209ENST00000495630 ACSL1P33121 698 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 GRK6P43250 576 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 GCLMP48507 274 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 YWHAGP61981 247 aaKnown RBP eCLIP18.36■□□□□ 0.53
TMEM53-209ENST00000495630 ZBTB16Q05516 673 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 CYP4F3Q08477 520 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 TRIP4Q15650 581 aaPredicted RBP18.36■□□□□ 0.53
TMEM53-209ENST00000495630 RAB41Q5JT25 222 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 ATL3Q6DD88 541 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 PM20D1Q6GTS8 502 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 INTS8Q75QN2 995 aaKnown RBP18.36■□□□□ 0.53
TMEM53-209ENST00000495630 TTC39CQ8N584 583 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 ENGASEQ8NFI3 743 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 TAS1R2Q8TE23 839 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 SNX19Q92543 992 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 LHX5Q9H2C1 402 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 C6orf106Q9H6K1 298 aaPredicted RBP18.36■□□□□ 0.53
TMEM53-209ENST00000495630 FBRSQ9HAH7 460 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.36■□□□□ 0.53
TMEM53-209ENST00000495630 BTBD3Q9Y2F9 522 aa18.36■□□□□ 0.53
TMEM53-209ENST00000495630 GOLGA8CPA6NN73 597 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 K7ELQ4 463 aaPredicted RBP18.35■□□□□ 0.53
TMEM53-209ENST00000495630 PCDHGA12O60330 932 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 TSPAN3O60637 253 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 GRIA4P48058 902 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 HARS2P49590 506 aaKnown RBP18.35■□□□□ 0.53
TMEM53-209ENST00000495630 SLC8A3P57103 927 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 ZNF445P59923 1031 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 PPP3CAQ08209 521 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 CAMK2BQ13554 666 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 NFIL3Q16649 462 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 ZNF394Q53GI3 561 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 PIGZQ86VD9 579 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 PDCD7Q8N8D1 485 aaKnown RBP18.35■□□□□ 0.53
TMEM53-209ENST00000495630 WFIKKN2Q8TEU8 576 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 IGSF8Q969P0 613 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 LRIG1Q96JA1 1093 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 BTBD1Q9H0C5 482 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 TM9SF3Q9HD45 589 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 CABIN1Q9Y6J0 2220 aa18.35■□□□□ 0.53
TMEM53-209ENST00000495630 A0A087WV48 116 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 E9PAM4 449 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 ACTN4O43707 911 aaKnown RBP18.34■□□□□ 0.53
TMEM53-209ENST00000495630 DFNA5O60443 496 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 SEMA4FO95754 770 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 MYL1P05976 194 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 KRT13P13646 458 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 HLA-EP13747 358 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 CD27P26842 260 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 HOXD9P28356 352 aaPredicted RBP18.34■□□□□ 0.53
TMEM53-209ENST00000495630 GTF2H1P32780 548 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 SMAD1Q15797 465 aaKnown RBP18.34■□□□□ 0.53
TMEM53-209ENST00000495630 PTPRNQ16849 979 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 FNDC3BQ53EP0 1204 aaKnown RBP18.34■□□□□ 0.53
TMEM53-209ENST00000495630 KIAA0907Q7Z7F0 614 aaPredicted RBP18.34■□□□□ 0.53
TMEM53-209ENST00000495630 CACUL1Q86Y37 369 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 SCUBE3Q8IX30 993 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 ANKRD52Q8NB46 1076 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 BIRC7Q96CA5 298 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 TMA16Q96EY4 203 aaKnown RBP18.34■□□□□ 0.53
TMEM53-209ENST00000495630 TMEM176AQ96HP8 235 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 ARID3AQ99856 593 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 OLA1Q9NTK5 396 aaKnown RBP18.34■□□□□ 0.53
TMEM53-209ENST00000495630 USP25Q9UHP3 1055 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 STOML2Q9UJZ1 356 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 HBS1LQ9Y450 684 aaKnown RBP18.34■□□□□ 0.53
TMEM53-209ENST00000495630 SLCO1B1Q9Y6L6 691 aa18.34■□□□□ 0.53
TMEM53-209ENST00000495630 ASXL3Q9C0F0 2248 aa18.33■□□□□ 0.53
TMEM53-209ENST00000495630 KCNK3O14649 394 aa18.33■□□□□ 0.52
TMEM53-209ENST00000495630 ZBED1O96006 694 aa18.33■□□□□ 0.52
TMEM53-209ENST00000495630 HLA-FP30511 346 aa18.33■□□□□ 0.52
TMEM53-209ENST00000495630 MCCD1P59942 119 aaPredicted RBP18.33■□□□□ 0.52
TMEM53-209ENST00000495630 ADGRF1Q5T601 910 aa18.33■□□□□ 0.52
TMEM53-209ENST00000495630 ARHGAP17Q68EM7 881 aa18.33■□□□□ 0.52
TMEM53-209ENST00000495630 ADIPOR2Q86V24 386 aa18.33■□□□□ 0.52
TMEM53-209ENST00000495630 SLC4A11Q8NBS3 891 aa18.33■□□□□ 0.52
TMEM53-209ENST00000495630 SGK2Q9HBY8 427 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms