RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 ORAI3Q9BRQ5 295 aa7.42□□□□□ -1.22
TPR-208ENST00000492973 HAPLN2Q9GZV7 340 aa7.42□□□□□ -1.22
TPR-208ENST00000492973 CDT1Q9H211 546 aa7.42□□□□□ -1.22
TPR-208ENST00000492973 MTIF3Q9H2K0 278 aaKnown RBP7.42□□□□□ -1.22
TPR-208ENST00000492973 KCTD10Q9H3F6 313 aa7.42□□□□□ -1.22
TPR-208ENST00000492973 C1orf112Q9NSG2 853 aa7.42□□□□□ -1.22
TPR-208ENST00000492973 PCDHB2Q9Y5E7 798 aa7.42□□□□□ -1.22
TPR-208ENST00000492973 ARID2Q68CP9 1835 aa7.42□□□□□ -1.22
TPR-208ENST00000492973 SCN5AQ14524 2016 aa7.42□□□□□ -1.22
TPR-208ENST00000492973 TANC1Q9C0D5 1861 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 A0A0B4J269 797 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 A0A1W2PPC1 479 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 TRIM49BA6NDI0 452 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 GOLGA6L19H0YKK7 550 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 CBX4O00257 560 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 SCDO00767 359 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 PSMA7O14818 248 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 EIF3DO15371 548 aaKnown RBP eCLIP7.41□□□□□ -1.22
TPR-208ENST00000492973 TOM1L1O75674 476 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 KIF20AO95235 890 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 GJB5O95377 273 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 IBSPP21815 317 aaPredicted RBP7.41□□□□□ -1.22
TPR-208ENST00000492973 ADSSP30520 456 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 FLT3P36888 993 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 GATMP50440 423 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 RABGGTBP53611 331 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 MLLT6P55198 1093 aaPredicted RBP7.41□□□□□ -1.22
TPR-208ENST00000492973 HTRA4P83105 476 aaPredicted RBP7.41□□□□□ -1.22
TPR-208ENST00000492973 NCBP1Q09161 790 aaKnown RBP7.41□□□□□ -1.22
TPR-208ENST00000492973 ALCAMQ13740 583 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 ARHGAP44Q17R89 818 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 KNOP1Q1ED39 458 aaKnown RBP7.41□□□□□ -1.22
TPR-208ENST00000492973 CLLU1OSQ5K130 101 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 PIK3R6Q5UE93 754 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 SDE2Q6IQ49 451 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 TTI2Q6NXR4 508 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 SLC27A1Q6PCB7 646 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 FOXR2Q6PJQ5 311 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 LRRTM3Q86VH5 581 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 ZNF761Q86XN6 746 aaPredicted RBP7.41□□□□□ -1.22
TPR-208ENST00000492973 NELFCDQ8IXH7 590 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 RNF169Q8NCN4 708 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 ZCCHC14Q8WYQ9 949 aaKnown RBP7.41□□□□□ -1.22
TPR-208ENST00000492973 LPPQ93052 612 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 BOCQ9BWV1 1114 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 KRTAP9-9Q9BYP9 154 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 KRTAP9-4Q9BYQ2 154 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 NXF3Q9H4D5 531 aaKnown RBP7.41□□□□□ -1.22
TPR-208ENST00000492973 ELAC1Q9H777 363 aaKnown RBP7.41□□□□□ -1.22
TPR-208ENST00000492973 PARD6AQ9NPB6 346 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 SAMSN1Q9NSI8 373 aaKnown RBP7.41□□□□□ -1.22
TPR-208ENST00000492973 TMEM161AQ9NX61 479 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 TRAF3IP3Q9Y228 551 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 NFE2L3Q9Y4A8 694 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 HES2Q9Y543 173 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 IPPQ9Y573 584 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 STYXL1Q9Y6J8 313 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 ZMYM2Q9UBW7 1377 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 SIP14410 1827 aa7.41□□□□□ -1.22
TPR-208ENST00000492973 CHD7Q9P2D1 2997 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.4□□□□□ -1.22
TPR-208ENST00000492973 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.4□□□□□ -1.22
TPR-208ENST00000492973 BICDL2A1A5D9 508 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 LCHNA4D1U4 455 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 PDXKO00764 312 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 HNRNPDLO14979 420 aaKnown RBP7.4□□□□□ -1.22
TPR-208ENST00000492973 TGFB1I1O43294 461 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 FAM189A1O60320 539 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 STAG3L1P0CL83 205 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 MCF2P10911 925 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 HARSP12081 509 aaKnown RBP7.4□□□□□ -1.22
TPR-208ENST00000492973 ATP1A3P13637 1013 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 MYOGP15173 224 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 ZNF18P17022 549 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 AOAHP28039 575 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 ABCD1P33897 745 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 KCNC1P48547 511 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 LIG4P49917 911 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 RAB27AP51159 221 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 IRF9Q00978 393 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 MCL1Q07820 350 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 DCAF4L1Q3SXM0 396 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 LRIT3Q3SXY7 679 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 ZNF568Q3ZCX4 644 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 ZCWPW2Q504Y3 356 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 ZBTB41Q5SVQ8 909 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 UBE2R2Q712K3 238 aaPredicted RBP7.4□□□□□ -1.22
TPR-208ENST00000492973 SYT8Q8NBV8 401 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 ADAMTS17Q8TE56 1095 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 ZNF689Q96CS4 500 aaPredicted RBP7.4□□□□□ -1.22
TPR-208ENST00000492973 MFSD3Q96ES6 412 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 BICD1Q96G01 975 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 CASD1Q96PB1 797 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 RAD9AQ99638 391 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 CBWD1Q9BRT8 395 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 APOL6Q9BWW8 343 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 XYLT2Q9H1B5 865 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 CXCL16Q9H2A7 254 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 CROTQ9UKG9 612 aa7.4□□□□□ -1.22
TPR-208ENST00000492973 EXOC7Q9UPT5 735 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms