RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 PACSIN1Q9BY11 444 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 OSBPL6Q9BZF3 934 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 ELP3Q9H9T3 547 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 SLC24A3Q9HC58 644 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 ATAD3AQ9NVI7 634 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 HPS5Q9UPZ3 1129 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 SPEF2Q9C093 1822 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 ATXN2Q99700 1313 aaKnown RBP9.07□□□□□ -0.96
LSAMP-205ENST00000490035 BTNL10A8MVZ5 291 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 URODP06132 367 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 RPL22P35268 128 aaKnown RBP9.07□□□□□ -0.96
LSAMP-205ENST00000490035 BHLHB9Q6PI77 547 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 ADHFE1Q8IWW8 467 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 ABRAQ8N0Z2 381 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 MIER2Q8N344 545 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 BLOC1S5Q8TDH9 187 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 TRPC4APQ8TEL6 797 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 HMG20AQ9NP66 347 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 SMIM22K7EJ46 135 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 RGS14O43566 566 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 SGTAO43765 313 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 BCL10O95999 233 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 PTPN11Q06124 597 aaPredicted RBP9.07□□□□□ -0.96
LSAMP-205ENST00000490035 PKN1Q16512 942 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 FBXO47Q5MNV8 452 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 MARC1Q5VT66 337 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 SPOCD1Q6ZMY3 1216 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 PGBD3Q8N328 593 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 NKX2-3Q8TAU0 364 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 ATP8B4Q8TF62 1192 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 AGO4Q9HCK5 861 aaKnown RBP9.07□□□□□ -0.96
LSAMP-205ENST00000490035 GPAMQ9HCL2 828 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 MAN1C1Q9NR34 630 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 CISHQ9NSE2 258 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 MBD2Q9UBB5 411 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 ADAM28Q9UKQ2 775 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 DCDC2CA8MYV0 355 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 ZBTB39O15060 712 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 OTUD4Q01804 1114 aaKnown RBP9.07□□□□□ -0.96
LSAMP-205ENST00000490035 MDH1BQ5I0G3 518 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 ZBTB49Q6ZSB9 765 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 NSMCE2Q96MF7 247 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 Q96MT0 163 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 BTBD10Q9BSF8 475 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 AGXT2Q9BYV1 514 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 DEFB129Q9H1M3 183 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 PXMP2Q9NR77 195 aa9.07□□□□□ -0.96
LSAMP-205ENST00000490035 CTDNEP1O95476 244 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 SLC1A6P48664 564 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 TGFB2P61812 414 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 TCEA2Q15560 299 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 NEK10Q6ZWH5 1172 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 SLC25A41Q8N5S1 370 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 FAM172AQ8WUF8 416 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 CLEC4MQ9H2X3 399 aaPredicted RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 RAB21Q9UL25 225 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 FRMPD4Q14CM0 1322 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 F5H423 210 aaPredicted RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 CHADO15335 359 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 OR56A5P0C7T3 313 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 CCNA2P20248 432 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 NPTX2P47972 431 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 DRG2P55039 364 aaKnown RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 SMIM11AP58511 58 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 GRB10Q13322 594 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 LRRC36Q1X8D7 754 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 PGM2Q96G03 612 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 YIPF2Q9BWQ6 316 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 SH3BP4Q9P0V3 963 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 FAM196BA6NMK8 535 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 ALADP13716 330 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 ANTXR2P58335 489 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 RRP1BQ14684 758 aaKnown RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 LENG9Q96B70 501 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 SPATA17Q96L03 361 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 ADARB2Q9NS39 739 aaKnown RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 NDUFAF1Q9Y375 327 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 MYH9P35579 1960 aaKnown RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 ERVK-10P10266 1014 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 ZNF157P51786 506 aaPredicted RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 NDUFA5Q16718 116 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 LMBRD2Q68DH5 695 aaPredicted RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 PMF1Q6P1K2 205 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 TMEM26Q6ZUK4 368 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 EPB41L4AQ9HCS5 686 aaPredicted RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 NMRK2Q9NPI5 230 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 ADPRHL2Q9NX46 363 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 PLA2G4CQ9UP65 541 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 GSTK1Q9Y2Q3 226 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 A0A087WXM4 84 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 VIL1P09327 827 aaKnown RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 TGFBR2P37173 567 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 STAT5AP42229 794 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 KCNMA1Q12791 1236 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 DGUOKQ16854 277 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 NOA1Q8NC60 698 aaKnown RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 UBA3Q8TBC4 463 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 MCOLN3Q8TDD5 553 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 CCDC154A6NI56 674 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 CXCL11O14625 94 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms