RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 ZNF543Q08ER8 600 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 GPS1Q13098 491 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 ACSM6Q6P461 480 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 TLDC1Q6P9B6 456 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 UEVLDQ8IX04 471 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 NLRP4Q96MN2 994 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 PIMREGQ9BSJ6 248 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 PNPLA8Q9NP80 782 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 DECR2Q9NUI1 292 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 WWOXQ9NZC7 414 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 TMOD4Q9NZQ9 345 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 COG5Q9UP83 839 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 CORO2BQ9UQ03 480 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 SNX13Q9Y5W8 968 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 TMEM272A0A1B0GTI8 110 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 RHPN2P1A8MT19 583 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 TTC34A8MYJ7 566 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 M0QZQ0 153 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 PRPF4O43172 522 aaKnown RBP eCLIP3.59□□□□□ -1.83
CPSF3-205ENST00000489629 CCNT2O60583 730 aaKnown RBP3.59□□□□□ -1.83
CPSF3-205ENST00000489629 UGDHO60701 494 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 COQ9O75208 318 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 SGPL1O95470 568 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 FGFR2P21802 821 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 MMP8P22894 467 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 STAT6P42226 847 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 CDKN2AP42771 156 aaKnown RBP3.59□□□□□ -1.83
CPSF3-205ENST00000489629 ALDH7A1P49419 539 aaKnown RBP3.59□□□□□ -1.83
CPSF3-205ENST00000489629 AGTR2P50052 363 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 DMWDQ09019 674 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 SEMA3BQ13214 749 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 ATP1A4Q13733 1029 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 PRTGQ2VWP7 1150 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 ODF3L2Q3SX64 289 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 FAXCQ5TGI0 409 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 KLHDC7AQ5VTJ3 777 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 RAP1GAP2Q684P5 730 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 MRNIPQ6NTE8 343 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 USP17L6PQ6QN14 398 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 RFX8Q6ZV50 586 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 LAS2Q8IYD9 372 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 ADGRF4Q8IZF3 695 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 RBMXL3Q8N7X1 1067 aaKnown RBP3.59□□□□□ -1.83
CPSF3-205ENST00000489629 ARL14EPQ8N8R7 260 aaPredicted RBP3.59□□□□□ -1.83
CPSF3-205ENST00000489629 OR52L2PQ8NGH6 319 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 GLMPQ8WWB7 406 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 ASB12Q8WXK4 309 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 OVCA2Q8WZ82 227 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 TIFAQ96CG3 184 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 LRRC46Q96FV0 321 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 GDF15Q99988 308 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 TTLL2Q9BWV7 592 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 MYO1AQ9UBC5 1043 aa3.59□□□□□ -1.83
CPSF3-205ENST00000489629 KIR2DS5A0A0G2JLQ3 304 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 KIR2DS3K7RE56 304 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 DHHO43323 396 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 WNT1P04628 370 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 ENO1P06733 434 aaKnown RBP3.58□□□□□ -1.84
CPSF3-205ENST00000489629 HOXB2P14652 356 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 TSHRP16473 764 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 GABRB3P28472 473 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 POLD2P49005 469 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 CASP5P51878 434 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 BFSP2Q13515 415 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 PGM5Q15124 567 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 ELF2Q15723 593 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 INPP5JQ15735 1006 aaPredicted RBP3.58□□□□□ -1.84
CPSF3-205ENST00000489629 SMTNL2Q2TAL5 461 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 ASPHD1Q5U4P2 390 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 CCDC144NLQ6NUI1 221 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 ZNF474Q6S9Z5 364 aaPredicted RBP3.58□□□□□ -1.84
CPSF3-205ENST00000489629 PIK3AP1Q6ZUJ8 805 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 SKAP1Q86WV1 359 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 RHPN2Q8IUC4 686 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 CCDC28AQ8IWP9 274 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 ASB5Q8WWX0 329 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 CDCP1Q9H5V8 836 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 THSD1Q9NS62 852 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 GJB4Q9NTQ9 266 aa3.58□□□□□ -1.84
CPSF3-205ENST00000489629 ZMYND8Q9ULU4 1186 aaPredicted RBP3.58□□□□□ -1.84
CPSF3-205ENST00000489629 ZNF335Q9H4Z2 1342 aaPredicted RBP3.58□□□□□ -1.84
CPSF3-205ENST00000489629 A0A1W2PPC4 97 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 SPTLC2O15270 562 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 MYL4P12829 197 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 ALADP13716 330 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 TBXAS1P24557 533 aaPredicted RBP3.57□□□□□ -1.84
CPSF3-205ENST00000489629 SLC5A9Q2M3M2 681 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.57□□□□□ -1.84
CPSF3-205ENST00000489629 PIK3CD-AS1Q5SR53 167 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 NUGGCQ68CJ6 796 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 EMSYQ7Z589 1322 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 SMRP1Q8NCR6 262 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 SPATA3Q8NHX4 192 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 THOC3Q96J01 351 aaKnown RBP3.57□□□□□ -1.84
CPSF3-205ENST00000489629 CTAGE1Q96RT6 745 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 ELOVL1Q9BW60 279 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 COLEC11Q9BWP8 271 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 MAGEB5Q9BZ81 275 aa3.57□□□□□ -1.84
CPSF3-205ENST00000489629 MRPL44Q9H9J2 332 aaKnown RBP3.57□□□□□ -1.84
CPSF3-205ENST00000489629 POM121BA6NF01 834 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms