RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 YME1L1Q96TA2 773 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 ELF4Q99607 663 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 C7orf25Q9BPX7 421 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 ADPGKQ9BRR6 497 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 NTPCRQ9BSD7 190 aaKnown RBP8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 KIFC3Q9BVG8 833 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 MINDY3Q9H8M7 445 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 EMC7Q9NPA0 242 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 PANK4Q9NVE7 773 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 HPSEQ9Y251 543 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 RALGAPA2Q2PPJ7 1873 aa8.71□□□□□ -1.01
TRAPPC12-221ENST00000489032 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 TCAF2A6NFQ2 919 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 ALG1L2C9J202 215 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 ETV2O00321 342 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 ACKR2O00590 384 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 SLC16A4O15374 487 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 TSPAN1O60635 241 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 KINO60870 393 aaKnown RBP8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 TBX10O75333 385 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 LSP1P33241 339 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 FNTBP49356 437 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 NDUFV1P49821 464 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 ZNF131P52739 623 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 EPHB3P54753 998 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 UBE2HP62256 183 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 DBPQ10586 325 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 MAPK7Q13164 816 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 ALCAMQ13740 583 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 TCTN1Q2MV58 587 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 LONRF3Q496Y0 759 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 XP32Q5T750 250 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 L1TD1Q5T7N2 865 aaKnown RBP8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 CD276Q5ZPR3 534 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 FSTL4Q6MZW2 842 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 HAUS6Q7Z4H7 955 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 B3GNT8Q7Z7M8 397 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 SPATS2Q86XZ4 545 aaKnown RBP8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 RNF169Q8NCN4 708 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 STAMQ92783 540 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 TOP1MTQ969P6 601 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 BICD1Q96G01 975 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 CPB2Q96IY4 423 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 SIGLEC10Q96LC7 697 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 RIPOR3Q96MK2 946 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 TMEM209Q96SK2 561 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 FAM126AQ9BYI3 521 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 TRIM9Q9C026 710 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 LMAN2LQ9H0V9 348 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 FZD8Q9H461 694 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 ELAC1Q9H777 363 aaKnown RBP8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 MRPL44Q9H9J2 332 aaKnown RBP8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 TMEM161AQ9NX61 479 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 HSPBP1Q9NZL4 362 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 EXOC7Q9UPT5 735 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 BAHCC1Q9P281 2608 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 CNTNAP2Q9UHC6 1331 aa8.71□□□□□ -1.02
TRAPPC12-221ENST00000489032 MYO7AQ13402 2215 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 ATG2AQ2TAZ0 1938 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 MYH11P35749 1972 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 A0A0U1RQF3 1178 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 MGEA5O60502 916 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 GCNT3O95395 438 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 C8BP07358 591 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 MMEP08473 750 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 ATF2P15336 505 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 ARF4P18085 180 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 CD40P25942 277 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 MATR3P43243 847 aaKnown RBP eCLIP8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 ADCY1Q08828 1119 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 FAPQ12884 760 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 DCAF4L1Q3SXM0 396 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 ATF7IP2Q5U623 682 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 SLC27A1Q6PCB7 646 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 TMC5Q6UXY8 1006 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 KRBA2Q6ZNG9 492 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 UNC13DQ70J99 1090 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 RTN4RL1Q86UN2 441 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 SFR1Q86XK3 245 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 ECHDC2Q86YB7 292 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 IGDCC3Q8IVU1 814 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 TMEM161BQ8NDZ6 487 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 RSPH1Q8WYR4 309 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 SYAP1Q96A49 352 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 HVCN1Q96D96 273 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 DNAJC19Q96DA6 116 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 PAGE5Q96GU1 130 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 TCHPQ9BT92 498 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 GOLPH3LQ9H4A5 285 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 UBN1Q9NPG3 1134 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 LMBRD1Q9NUN5 540 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 EXOC1Q9NV70 894 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 ASB1Q9Y576 335 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 PCDHB2Q9Y5E7 798 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 ADGRA3Q8IWK6 1321 aa8.7□□□□□ -1.02
TRAPPC12-221ENST00000489032 GVINP1Q7Z2Y8 2422 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 A0A1B0GUA9 196 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 PVALEFA0A1B0GWK0 134 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 FRMD3A2A2Y4 597 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms