RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TXNRD2Q9NNW7 524 aa12.15□□□□□ -0.47
TRA2B-214ENST00000487615 MRPL40Q9NQ50 206 aaKnown RBP12.15□□□□□ -0.47
TRA2B-214ENST00000487615 IARS2Q9NSE4 1012 aaKnown RBP12.15□□□□□ -0.47
TRA2B-214ENST00000487615 SMIM28A0A1B0GU29 152 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.14□□□□□ -0.47
TRA2B-214ENST00000487615 MAGEB16A2A368 324 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 RALBP11234 206 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 YBX3P16989 372 aaKnown RBP eCLIP12.14□□□□□ -0.473e-7■■□□□ 12.8
TRA2B-214ENST00000487615 PTPN4P29074 926 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 SCNN1GP51170 649 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 NSUN2Q08J23 767 aaKnown RBP eCLIP12.14□□□□□ -0.47
TRA2B-214ENST00000487615 CDH17Q12864 832 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 RASA2Q15283 850 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 RBBP5Q15291 538 aaKnown RBP12.14□□□□□ -0.47
TRA2B-214ENST00000487615 RABGAP1LQ5R372 815 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 RNASEH2BQ5TBB1 312 aaKnown RBP12.14□□□□□ -0.47
TRA2B-214ENST00000487615 IL31Q6EBC2 164 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 TMEM192Q8IY95 271 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 KIRREL3Q8IZU9 778 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 PIK3R5Q8WYR1 880 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 CD101Q93033 1021 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 RPRD1AQ96P16 312 aaPredicted RBP12.14□□□□□ -0.47
TRA2B-214ENST00000487615 TSPAN18Q96SJ8 248 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 ILKAPQ9H0C8 392 aaPredicted RBP12.14□□□□□ -0.47
TRA2B-214ENST00000487615 SUN2Q9UH99 717 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 DNAJC16Q9Y2G8 782 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 GRIN2DO15399 1336 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 ATXN2Q99700 1313 aaKnown RBP12.14□□□□□ -0.47
TRA2B-214ENST00000487615 TCRBV9S1A1TA0A576 114 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 GLTPD2A6NH11 291 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 E5RI56 91 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 GOT1P17174 413 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 SLC12A1Q13621 1099 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 EFTUD2Q15029 972 aaKnown RBP eCLIP12.14□□□□□ -0.479e-15■■□□□ 12.4
TRA2B-214ENST00000487615 MAPRE2Q15555 327 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 TARBP2Q15633 366 aaKnown RBP12.14□□□□□ -0.47
TRA2B-214ENST00000487615 PMF1Q6P1K2 205 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 NIPA2Q8N8Q9 360 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 MAML3Q96JK9 1138 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 VAT1Q99536 393 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 ADA2Q9NZK5 511 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.14□□□□□ -0.47
TRA2B-214ENST00000487615 CPSF2Q9P2I0 782 aaKnown RBP12.14□□□□□ -0.47
TRA2B-214ENST00000487615 PTPRJQ12913 1337 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 LOC100653049A0A140TA62 436 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 XPO1O14980 1071 aaKnown RBP12.14□□□□□ -0.47
TRA2B-214ENST00000487615 KRT34O76011 436 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 CD48P09326 243 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 CPA3P15088 417 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 BDNFP23560 247 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 N4BP2L1Q5TBK1 243 aaPredicted RBP12.14□□□□□ -0.47
TRA2B-214ENST00000487615 FRA10AC1Q70Z53 315 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 SH3TC2Q8TF17 1288 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 FBXO32Q969P5 355 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 KCNK16Q96T55 309 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 PRDM12Q9H4Q4 367 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 MINDY3Q9H8M7 445 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 SARS2Q9NP81 518 aaKnown RBP12.14□□□□□ -0.47
TRA2B-214ENST00000487615 XPNPEP3Q9NQH7 507 aa12.14□□□□□ -0.47
TRA2B-214ENST00000487615 ATP6V1G2O95670 118 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 GFAPP14136 432 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 MRPS6P82932 125 aaKnown RBP12.13□□□□□ -0.47
TRA2B-214ENST00000487615 ARHGAP1Q07960 439 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 XRCC4Q13426 336 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 FASTKD3Q14CZ7 662 aaKnown RBP12.13□□□□□ -0.47
TRA2B-214ENST00000487615 ILDR2Q71H61 639 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 STRADAQ7RTN6 431 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 TOP6BLQ8N6T0 577 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 PHACTR1Q9C0D0 580 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 TKTL2Q9H0I9 626 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 MYLK2Q9H1R3 596 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 CASQ2O14958 399 aaPredicted RBP12.13□□□□□ -0.47
TRA2B-214ENST00000487615 ETFBP38117 255 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 SPANXN3Q5MJ09 141 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 RNF43Q68DV7 783 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 PLD5Q8N7P1 536 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 SLCO1B3Q9NPD5 702 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 A0A1W2PPM1 405 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 USP12O75317 370 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 SMPD1P17405 629 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 PSMB4P28070 264 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 COPAP53621 1224 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 MRPS5P82675 430 aaKnown RBP12.13□□□□□ -0.47
TRA2B-214ENST00000487615 FAM83EQ2M2I3 478 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 STKLD1Q8NE28 680 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 PCYT2Q99447 389 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 EBNA1BP2Q99848 306 aaKnown RBP12.13□□□□□ -0.47
TRA2B-214ENST00000487615 DDX50Q9BQ39 737 aaKnown RBP12.13□□□□□ -0.47
TRA2B-214ENST00000487615 COLEC11Q9BWP8 271 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 DUSP16Q9BY84 665 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 UBE2OQ9C0C9 1292 aaKnown RBP12.13□□□□□ -0.47
TRA2B-214ENST00000487615 GOLGA2P5Q9HBQ8 144 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 RBM22Q9NW64 420 aaKnown RBP eCLIP12.13□□□□□ -0.472e-6■■■■□ 26.1
TRA2B-214ENST00000487615 LGALS13Q9UHV8 139 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 IPPQ9Y573 584 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 C2CD4BA6NLJ0 364 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 SH3BP5O60239 455 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 NAB1Q13506 487 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 CTXN3Q4LDR2 81 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 CES3Q6UWW8 571 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms