RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, human

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-234	ENST00000487604	ALDH7A1	P49419	539 aa	Known RBP	4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	AGTR2	P50052	363 aa		4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	ZNF543	Q08ER8	600 aa		4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	SEMA3B	Q13214	749 aa		4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	FAXC	Q5TGI0	409 aa		4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	KLHDC7A	Q5VTJ3	777 aa		4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	B4GALNT4	Q76KP1	1039 aa		4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	B4GALNT2	Q8NHY0	566 aa		4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	ASB5	Q8WWX0	329 aa		4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	LRRC46	Q96FV0	321 aa		4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	THOC3	Q96J01	351 aa	Known RBP	4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	TTLL2	Q9BWV7	592 aa		4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	CORO2B	Q9UQ03	480 aa		4.22	□□□□□ -1.73
RBM39-234	ENST00000487604	SPATA31A5	Q5VU36	1347 aa		4.21	□□□□□ -1.73
RBM39-234	ENST00000487604	SPATA31A7	Q8IWB4	1347 aa		4.21	□□□□□ -1.73
RBM39-234	ENST00000487604	CLCA1	A8K7I4	914 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	PRPF4	O43172	522 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	CCNT2	O60583	730 aa	Known RBP	4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	SYF2	O95926	243 aa	Known RBP	4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	SLC3A2	P08195	630 aa	Known RBP	4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	MATN1	P21941	496 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	MMP8	P22894	467 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	BFSP2	Q13515	415 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	ELF2	Q15723	593 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	ODF3L2	Q3SX64	289 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	NUGGC	Q68CJ6	796 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	TTLL5	Q6EMB2	1281 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	KIAA0408	Q6ZU52	694 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	ADGRF4	Q8IZF3	695 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	CLASRP	Q8N2M8	674 aa	Known RBP	4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	SMRP1	Q8NCR6	262 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	OR52L2P	Q8NGH6	319 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	ZNF845	Q96IR2	970 aa	Predicted RBP	4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	PIMREG	Q9BSJ6	248 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	MRPL44	Q9H9J2	332 aa	Known RBP	4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	PNPLA8	Q9NP80	782 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	PRDM11	Q9NQV5	511 aa		4.21	□□□□□ -1.74
RBM39-234	ENST00000487604	KIR2DS5	A0A0G2JLQ3	304 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	RHPN2P1	A8MT19	583 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	KIR2DS3	K7RE56	304 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604		M0QZQ0	153 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	ZSCAN9	O15535	394 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	ENO1	P06733	434 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	T-ENOL	P0DO92	83 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	HOXB2	P14652	356 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	MST1	P26927	711 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	SLC5A2	P31639	672 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	STAT6	P42226	847 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	PTGR1	Q14914	329 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	PGM5	Q15124	567 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	INPP5J	Q15735	1006 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	PIK3CD-AS1	Q5SR53	167 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	RAP1GAP2	Q684P5	730 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	MRNIP	Q6NTE8	343 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	ACSM6	Q6P461	480 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	TLDC1	Q6P9B6	456 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	PIK3AP1	Q6ZUJ8	805 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	SKAP1	Q86WV1	359 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	CCDC28A	Q8IWP9	274 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	TMEM199	Q8N511	208 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	RNF152	Q8N8N0	203 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	OVCA2	Q8WZ82	227 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	TIFA	Q96CG3	184 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	ZPBP	Q9BS86	351 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	CDCP1	Q9H5V8	836 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	THSD1	Q9NS62	852 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	GJB4	Q9NTQ9	266 aa		4.2	□□□□□ -1.74
RBM39-234	ENST00000487604	PQBP1	O60828	265 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	SGPL1	O95470	568 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	ALAD	P13716	330 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	FGFR2	P21802	821 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	TBXAS1	P24557	533 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	ARRB2	P32121	409 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	POLD2	P49005	469 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	PGGT1B	P53609	377 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	P2RX3	P56373	397 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	PPAT	Q06203	517 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	DMWD	Q09019	674 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	ATP1A4	Q13733	1029 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	SMTNL2	Q2TAL5	461 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	CCDC144NL	Q6NUI1	221 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	USP17L6P	Q6QN14	398 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	DLK2	Q6UY11	383 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	RHPN2	Q8IUC4	686 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	LAS2	Q8IYD9	372 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	ASB12	Q8WXK4	309 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	KAT2B	Q92831	832 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	CTAGE1	Q96RT6	745 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	MAGEB5	Q9BZ81	275 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	MYO1A	Q9UBC5	1043 aa		4.19	□□□□□ -1.74
RBM39-234	ENST00000487604	POM121B	A6NF01	834 aa		4.18	□□□□□ -1.74
RBM39-234	ENST00000487604	OR2W5	A6NFC9	320 aa		4.18	□□□□□ -1.74
RBM39-234	ENST00000487604	SLC28A2	O43868	658 aa		4.18	□□□□□ -1.74
RBM39-234	ENST00000487604	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
RBM39-234	ENST00000487604	RFPL3S	P0C7P2	107 aa		4.18	□□□□□ -1.74
RBM39-234	ENST00000487604	AKR1A1	P14550	325 aa		4.18	□□□□□ -1.74
RBM39-234	ENST00000487604	DLGAP5	Q15398	846 aa		4.18	□□□□□ -1.74

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