RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 FPGT-TNNI3KV9GXZ4 949 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 NPC1L1Q9UHC9 1359 aa4.53□□□□□ -1.69
PTCD3-216ENST00000487043 MYOM1P52179 1685 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 PPM1DO15297 605 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 CYP27B1O15528 508 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 GPR42O15529 346 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 DHHO43323 396 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 RECQL4O94761 1208 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 VNN1O95497 513 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 TBX18O95935 607 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 PDHA1P08559 390 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 CAPN3P20807 821 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 ACO1P21399 889 aaKnown RBP4.52□□□□□ -1.69
PTCD3-216ENST00000487043 COMTP21964 271 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 GATA3P23771 443 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 SERPINA4P29622 427 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 RXRGP48443 463 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 RBM5P52756 815 aaKnown RBP eCLIP4.52□□□□□ -1.69
PTCD3-216ENST00000487043 CHRNDQ07001 517 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 SF3A3Q12874 501 aaKnown RBP eCLIP4.52□□□□□ -1.697e-9■■□□□ 11.9
PTCD3-216ENST00000487043 PDCLQ13371 301 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 CYP2A13Q16696 494 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 TRIM60Q495X7 471 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 SPDYE7PQ495Y7 208 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 GALNTL6Q49A17 601 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 SLC9A4Q6AI14 798 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 MAMDC4Q6UXC1 1216 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 SYNE3Q6ZMZ3 975 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 IZUMO1Q8IYV9 350 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 SYNE4Q8N205 404 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 TCP11L2Q8N4U5 519 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 SUN3Q8TAQ9 357 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 ATG4AQ8WYN0 398 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 NACC2Q96BF6 587 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 MCRS1Q96EZ8 462 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 FAM89AQ96GI7 184 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 TWNKQ96RR1 684 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 HAPLN3Q96S86 360 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 NUDT22Q9BRQ3 303 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 MECRQ9BV79 373 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 INO80BQ9C086 356 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-216ENST00000487043 NOD2Q9HC29 1040 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 G6PC2Q9NQR9 355 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 RASSF1Q9NS23 344 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 TMEM160Q9NX00 188 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 NDUFAF4Q9P032 175 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 RIMKLBQ9ULI2 386 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 ARHGAP26Q9UNA1 814 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 DERAQ9Y315 318 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 TSC22D4Q9Y3Q8 395 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 NOX1Q9Y5S8 564 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 NCOA3Q9Y6Q9 1424 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 STRCQ7RTU9 1775 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 ADGRB2O60241 1585 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 ANKRD36BQ8N2N9 1353 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 PARD3Q8TEW0 1356 aa4.52□□□□□ -1.69
PTCD3-216ENST00000487043 ITIH6Q6UXX5 1313 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 AHRRA9YTQ3 701 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 CYR61O00622 381 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 SLPIP03973 132 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 ERBB2P04626 1255 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 CFIP05156 583 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 DRD1P21728 446 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 HTR7P34969 479 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 PBX1P40424 430 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 EIF5P55010 431 aaKnown RBP4.51□□□□□ -1.69
PTCD3-216ENST00000487043 NR1H2P55055 460 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 TIAL1Q01085 375 aaKnown RBP eCLIP4.51□□□□□ -1.695e-7■■■■□ 26.5
PTCD3-216ENST00000487043 TMEM196Q5HYL7 178 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 CC2D1BQ5T0F9 858 aaKnown RBP4.51□□□□□ -1.69
PTCD3-216ENST00000487043 L1TD1Q5T7N2 865 aaKnown RBP4.51□□□□□ -1.69
PTCD3-216ENST00000487043 MSANTD2Q6P1R3 559 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 Q6ZSN1 163 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 ANKS1BQ7Z6G8 1248 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 TRABD2AQ86V40 505 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 FAM109AQ8N4B1 249 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 METTL25Q8N6Q8 603 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 NEUROD6Q96NK8 337 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 WDR24Q96S15 920 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 OSBPL9Q96SU4 736 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 CDK5RAP1Q96SZ6 601 aaKnown RBP4.51□□□□□ -1.69
PTCD3-216ENST00000487043 EIF3CQ99613 913 aaKnown RBP4.51□□□□□ -1.69
PTCD3-216ENST00000487043 TTPALQ9BTX7 342 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 VN1R3Q9BXE9 311 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 ACTRT3Q9BYD9 372 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 ALOXE3Q9BYJ1 711 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 GPR63Q9BZJ6 419 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 AMBRA1Q9C0C7 1298 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 DEF6Q9H4E7 631 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 ZNF768Q9H5H4 540 aaKnown RBP4.51□□□□□ -1.69
PTCD3-216ENST00000487043 CCDC134Q9H6E4 229 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 JMJD4Q9H9V9 463 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 ALG13Q9NP73 1137 aaKnown RBP4.51□□□□□ -1.69
PTCD3-216ENST00000487043 DRG1Q9Y295 367 aaKnown RBP4.51□□□□□ -1.69
PTCD3-216ENST00000487043 PCDHB7Q9Y5E2 793 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 PPIP5K1Q6PFW1 1433 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 NWD1Q149M9 1564 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 COL15A1P39059 1388 aa4.51□□□□□ -1.69
PTCD3-216ENST00000487043 NKTRP30414 1462 aaKnown RBP4.5□□□□□ -1.69
PTCD3-216ENST00000487043 ATP7BP35670 1465 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms