RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 PRR33A8MZF0 331 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 KIF28PB7ZC32 967 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 GCOM1H8Y6P7 765 aaPredicted RBP8.49□□□□□ -1.05
LSM5-210ENST00000480956 SLC25A17O43808 307 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 CCNT2O60583 730 aaKnown RBP8.49□□□□□ -1.05
LSM5-210ENST00000480956 TLR2O60603 784 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 DNAJB5O75953 348 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 RECQL5O94762 991 aaPredicted RBP8.49□□□□□ -1.05
LSM5-210ENST00000480956 LY86O95711 162 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 GAAP10253 952 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 KRT4P19013 534 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 CCNCP24863 283 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 SLC15A1P46059 708 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 ASMTP46597 345 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 RABIFP47224 123 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 EIF3BP55884 814 aaKnown RBP8.49□□□□□ -1.05
LSM5-210ENST00000480956 WNT3P56703 355 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 YPEL5P62699 121 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 GPS1Q13098 491 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 CDK5R2Q13319 367 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 CLCA4Q14CN2 919 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 RABL6Q3YEC7 729 aaPredicted RBP8.49□□□□□ -1.05
LSM5-210ENST00000480956 ARHGEF18Q6ZSZ5 1173 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 MSANTD1Q6ZTZ1 278 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 CCDC110Q8TBZ0 833 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 NEK1Q96PY6 1258 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 SLC5A7Q9GZV3 580 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 PCED1AQ9H1Q7 454 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 BCO1Q9HAY6 547 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 FSCN3Q9NQT6 498 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 TMEM140Q9NV12 185 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 DKK4Q9UBT3 224 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 CAB39Q9Y376 341 aaPredicted RBP8.49□□□□□ -1.05
LSM5-210ENST00000480956 PCDHB4Q9Y5E5 795 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 PCDHA5Q9Y5H7 936 aa8.49□□□□□ -1.05
LSM5-210ENST00000480956 TRBC2A0A5B9 178 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 TMEM82A0PJX8 343 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 SYCE3A1L190 88 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 OR6C76A6NM76 312 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 CCP110O43303 1012 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 GLI1P08151 1106 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 LTA4HP09960 611 aaKnown RBP8.48□□□□□ -1.05
LSM5-210ENST00000480956 XRCC6P12956 609 aaKnown RBP eCLIP8.48□□□□□ -1.05
LSM5-210ENST00000480956 ADSSP30520 456 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 DBPQ10586 325 aaPredicted RBP8.48□□□□□ -1.05
LSM5-210ENST00000480956 SF3A3Q12874 501 aaKnown RBP eCLIP8.48□□□□□ -1.051e-7■■■■□ 19.8
LSM5-210ENST00000480956 MTM1Q13496 603 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 BOP1Q14137 746 aaKnown RBP8.48□□□□□ -1.05
LSM5-210ENST00000480956 TRADDQ15628 312 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 CRY2Q49AN0 593 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 BOLA3Q53S33 107 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 CST9LP1Q5W188 147 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 SARM1Q6SZW1 724 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 C8orf86Q6ZUL3 223 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 BMP8AQ7Z5Y6 402 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 TMEM200AQ86VY9 491 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 MFSD4AQ8N468 514 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 OR7D4Q8NG98 312 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 KIAA1524Q8TCG1 905 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 SNX33Q8WV41 574 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 FAM111AQ96PZ2 611 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 CTAGE1Q96RT6 745 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 FIZ1Q96SL8 496 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 SLC25A32Q9H2D1 315 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 SLC32A1Q9H598 525 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 TTC12Q9H892 705 aaPredicted RBP8.48□□□□□ -1.05
LSM5-210ENST00000480956 PDE11AQ9HCR9 933 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 MBNL1Q9NR56 388 aaKnown RBP8.48□□□□□ -1.05
LSM5-210ENST00000480956 POLE3Q9NRF9 147 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 LIN7CQ9NUP9 197 aaKnown RBP8.48□□□□□ -1.05
LSM5-210ENST00000480956 APPL1Q9UKG1 709 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 NFU1Q9UMS0 254 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 CAPN6Q9Y6Q1 641 aa8.48□□□□□ -1.05
LSM5-210ENST00000480956 ADGRF5Q8IZF2 1346 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 A0A1W2PR48 441 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 AQP7P3A6NL99 342 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 GPR89AB7ZAQ6 455 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 M0R082 166 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 LARGE1O95461 756 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 ADCY5O95622 1261 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 MPIG6BO95866 241 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 GPR89BP0CG08 455 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 PTGS1P23219 599 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 CCR10P46092 362 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 STAT2P52630 851 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 SNRPNP63162 240 aaKnown RBP8.47□□□□□ -1.05
LSM5-210ENST00000480956 CCNA1P78396 465 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 INAQ16352 499 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 CCDC40Q4G0X9 1142 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 ZNF766Q5HY98 468 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 COLEC12Q5KU26 742 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 C12orf60Q5U649 245 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 DENND1BQ6P3S1 775 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 ZNF366Q8N895 744 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 ZNF417Q8TAU3 575 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 ZNF587Q96SQ5 575 aaPredicted RBP8.47□□□□□ -1.05
LSM5-210ENST00000480956 DUSP23Q9BVJ7 150 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 DPH5Q9H2P9 285 aa8.47□□□□□ -1.05
LSM5-210ENST00000480956 BARX1Q9HBU1 254 aaPredicted RBP8.47□□□□□ -1.05
LSM5-210ENST00000480956 ALKBH4Q9NXW9 302 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms