RNA–Protein interactions for RNA: ENST00000480686.5

RNF220-213, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-213ENST00000480686 AP4E1Q9UPM8 1137 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 SPEF1Q9Y4P9 236 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 SPO11Q9Y5K1 396 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 ZHX2Q9Y6X8 837 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 CLTCQ00610 1675 aaKnown RBP13.08□□□□□ -0.32
RNF220-213ENST00000480686 N4BP2Q86UW6 1770 aaPredicted RBP13.08□□□□□ -0.32
RNF220-213ENST00000480686 TMEM94Q12767 1356 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 LINC00854A0A1B0GVQ3 168 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 CLDN25C9JDP6 229 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 CLASP2O75122 1294 aaKnown RBP13.08□□□□□ -0.32
RNF220-213ENST00000480686 TIPRLO75663 272 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 BPGMP07738 259 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 ARPP19P56211 112 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 CDKL1Q00532 357 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 MOGQ16653 247 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 SMU1Q2TAY7 513 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 CHST15Q7LFX5 561 aaPredicted RBP13.08□□□□□ -0.32
RNF220-213ENST00000480686 DSELQ8IZU8 1212 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 NEDD1Q8NHV4 660 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 FEZF2Q8TBJ5 459 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 BHMTQ93088 406 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 FAM84BQ96KN1 310 aaPredicted RBP13.08□□□□□ -0.32
RNF220-213ENST00000480686 ZNF652Q9Y2D9 606 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 PCDHGA3Q9Y5H0 932 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 MRC1P22897 1456 aa13.08□□□□□ -0.32
RNF220-213ENST00000480686 ESYT2A0FGR8 921 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 RAD51BO15315 384 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 BTDP43251 543 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 MAP3K7CLP57077 242 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 SESN2P58004 480 aaPredicted RBP13.07□□□□□ -0.32
RNF220-213ENST00000480686 RPL26P61254 145 aaKnown RBP13.07□□□□□ -0.32
RNF220-213ENST00000480686 SF3B4Q15427 424 aaKnown RBP eCLIP13.07□□□□□ -0.327e-8■■■■□ 26
RNF220-213ENST00000480686 CDO1Q16878 200 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 CLEC16AQ2KHT3 1053 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 WDR45BQ5MNZ6 344 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 OTUD3Q5T2D3 398 aaPredicted RBP13.07□□□□□ -0.32
RNF220-213ENST00000480686 CCDC106Q9BWC9 280 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 DHX35Q9H5Z1 703 aaKnown RBP13.07□□□□□ -0.32
RNF220-213ENST00000480686 ANGPTL3Q9Y5C1 460 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 MYH3P11055 1940 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 STX16-NPEPL1H3BU86 382 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 NFIBO00712 420 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 ZBTB5O15062 677 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 ZBTB48P10074 688 aaPredicted RBP13.07□□□□□ -0.32
RNF220-213ENST00000480686 FDX1P10109 184 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 AOC1P19801 751 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 RPL22P35268 128 aaKnown RBP13.07□□□□□ -0.32
RNF220-213ENST00000480686 YAP1P46937 504 aaKnown RBP13.07□□□□□ -0.32
RNF220-213ENST00000480686 HADHBP55084 474 aaKnown RBP13.07□□□□□ -0.32
RNF220-213ENST00000480686 PHC1P78364 1004 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 FSTL1Q12841 308 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 ZNF846Q147U1 533 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 TBCELQ5QJ74 424 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 SLC9A4Q6AI14 798 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 PRR23BQ6ZRT6 265 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 CDHR3Q6ZTQ4 885 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 FLCNQ8NFG4 579 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 TAS1R2Q8TE23 839 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 OSCP1Q8WVF1 389 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 MBOAT7Q96N66 472 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 WDR55Q9H6Y2 383 aaPredicted RBP13.07□□□□□ -0.32
RNF220-213ENST00000480686 TEKT2Q9UIF3 430 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 CTDP1Q9Y5B0 961 aaPredicted RBP13.07□□□□□ -0.32
RNF220-213ENST00000480686 NOX1Q9Y5S8 564 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 A0A0B4J269 797 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 M0R2N6 131 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 EIF3DO15371 548 aaKnown RBP eCLIP13.07□□□□□ -0.32
RNF220-213ENST00000480686 ALBP02768 609 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 ATP5BP06576 529 aaKnown RBP13.07□□□□□ -0.32
RNF220-213ENST00000480686 STX1BP61266 288 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 TUBA4AP68366 448 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 SBK1Q52WX2 424 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 Q8N9G6 341 aaPredicted RBP13.07□□□□□ -0.32
RNF220-213ENST00000480686 STN1Q9H668 368 aaKnown RBP13.07□□□□□ -0.32
RNF220-213ENST00000480686 ACSS2Q9NR19 701 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 TLK1Q9UKI8 766 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 PCDHB2Q9Y5E7 798 aa13.07□□□□□ -0.32
RNF220-213ENST00000480686 FYNP06241 537 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 ALOX5P09917 674 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 ACAT1P24752 427 aaKnown RBP13.06□□□□□ -0.32
RNF220-213ENST00000480686 EPHA3P29320 983 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 PRKG1Q13976 671 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 MAPRE1Q15691 268 aaKnown RBP13.06□□□□□ -0.32
RNF220-213ENST00000480686 ARL13BQ3SXY8 428 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 RNASEH2BQ5TBB1 312 aaKnown RBP13.06□□□□□ -0.32
RNF220-213ENST00000480686 GATAD2AQ86YP4 633 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 CBWD2Q8IUF1 395 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 PLD3Q8IV08 490 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 ZC3H7AQ8IWR0 971 aaKnown RBP13.06□□□□□ -0.32
RNF220-213ENST00000480686 SLC44A1Q8WWI5 657 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 AASDHPPTQ9NRN7 309 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 TOPORSQ9NS56 1045 aaPredicted RBP13.06□□□□□ -0.32
RNF220-213ENST00000480686 RIC1Q4ADV7 1423 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 MYH11P35749 1972 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 SF3B1O75533 1304 aaKnown RBP eCLIP13.06□□□□□ -0.329e-6■■■■■ 68.9
RNF220-213ENST00000480686 USP12O75317 370 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 CLIC3O95833 236 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 GSNP06396 782 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 GCAP28676 217 aa13.06□□□□□ -0.32
RNF220-213ENST00000480686 POLD3Q15054 466 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms