RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 FCHO1O14526 889 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 GSC2O15499 205 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 TREHO43280 583 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 LYPLA1O75608 230 aaPredicted RBP11.16□□□□□ -0.62
VPS52-217ENST00000478934 CYP2C9P11712 490 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 MAGEA3P43357 314 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 ABCG1P45844 678 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 CDK16Q00536 496 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 AP1B1Q10567 949 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 DUSP28Q4G0W2 176 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 PPM1JQ5JR12 505 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 FAM72AQ5TYM5 149 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 FAM72DQ6L9T8 149 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 FAM72BQ86X60 149 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 TREML1Q86YW5 311 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 MAB21L3Q8N8X9 362 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 SHCBP1Q8NEM2 672 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 BRI3BPQ8WY22 251 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 CENPIQ92674 756 aaPredicted RBP11.16□□□□□ -0.62
VPS52-217ENST00000478934 MCUR1Q96AQ8 359 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 SKA1Q96BD8 255 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 MS4A4AQ96JQ5 239 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 BTBD10Q9BSF8 475 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 PNPLA8Q9NP80 782 aa11.16□□□□□ -0.62
VPS52-217ENST00000478934 TIMM13Q9Y5L4 95 aaPredicted RBP11.16□□□□□ -0.62
VPS52-217ENST00000478934 CCL15-CCL14A0A0B4J2E2 113 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 RBM47A0AV96 593 aaKnown RBP11.15□□□□□ -0.62
VPS52-217ENST00000478934 I6L893 689 aaPredicted RBP11.15□□□□□ -0.62
VPS52-217ENST00000478934 KCNK1O00180 336 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 SMAPO00193 183 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 MAP3K13O43283 966 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 GCATO75600 419 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 KRT37O76014 449 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 ESRRAP11474 423 aaPredicted RBP11.15□□□□□ -0.62
VPS52-217ENST00000478934 MGAT1P26572 445 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 SULT1E1P49888 294 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 RASSF2P50749 326 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 PGGT1BP53609 377 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 BEX3Q00994 111 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 BST2Q10589 180 aaKnown RBP11.15□□□□□ -0.62
VPS52-217ENST00000478934 CCL15Q16663 113 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 DGKDQ16760 1214 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 LDLRAD1Q5T700 205 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 KIAA0319Q5VV43 1072 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 HEATR6Q6AI08 1181 aaKnown RBP11.15□□□□□ -0.62
VPS52-217ENST00000478934 SLC26A9Q7LBE3 791 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 CHSY1Q86X52 802 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 CCNYQ8ND76 341 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 DEPDC1BQ8WUY9 529 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 NRG4Q8WWG1 115 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 HTR3CQ8WXA8 447 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 ATXN7L3BQ96GX2 97 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 EBF4Q9BQW3 602 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 OSBPL1AQ9BXW6 950 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 GCOM2Q9BZD3 368 aaPredicted RBP11.15□□□□□ -0.62
VPS52-217ENST00000478934 SNX10Q9Y5X0 201 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 USP3Q9Y6I4 520 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 MEI4A8MW99 385 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 PIRO00625 290 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 ITM2AO43736 263 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 TSHRP16473 764 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 ALDH18A1P54886 795 aaKnown RBP11.15□□□□□ -0.62
VPS52-217ENST00000478934 SLC8A3P57103 927 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 CCDC6Q16204 474 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 DCAF4L1Q3SXM0 396 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 ZNF410Q86VK4 478 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 CDKL3Q8IVW4 592 aaPredicted RBP11.15□□□□□ -0.62
VPS52-217ENST00000478934 SLC25A41Q8N5S1 370 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 COLGALT1Q8NBJ5 622 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 GSDMBQ8TAX9 411 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 USP6NLQ92738 828 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 EMID1Q96A84 441 aaPredicted RBP11.15□□□□□ -0.62
VPS52-217ENST00000478934 NSL1Q96IY1 281 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 AGAP3Q96P47 875 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 QKIQ96PU8 341 aaKnown RBP eCLIP11.15□□□□□ -0.62
VPS52-217ENST00000478934 TINF2Q9BSI4 451 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 SHCBP1LQ9BZQ2 653 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 SNX25Q9H3E2 840 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 ACSS2Q9NR19 701 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 ARHGEF4Q9NR80 690 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 ZNF358Q9NW07 568 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.15□□□□□ -0.62
VPS52-217ENST00000478934 PPARGC1AQ9UBK2 798 aaKnown RBP11.15□□□□□ -0.62
VPS52-217ENST00000478934 WASF2Q9Y6W5 498 aa11.15□□□□□ -0.62
VPS52-217ENST00000478934 FAM159BA6NKW6 160 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 CCDC22O60826 627 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 WFS1O76024 890 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 DARSP14868 501 aaKnown RBP11.14□□□□□ -0.63
VPS52-217ENST00000478934 KCNA4P22459 653 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 PSMB4P28070 264 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 MLH1P40692 756 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 PTPN9P43378 593 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 AQP5P55064 265 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 UBAP2LQ14157 1087 aaKnown RBP11.14□□□□□ -0.63
VPS52-217ENST00000478934 STILQ15468 1287 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 MUM1Q2TAK8 710 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 ARHGAP17Q68EM7 881 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 ANO7Q6IWH7 933 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 NOTUMQ6P988 496 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 PAQR9Q6ZVX9 377 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms