RNA–Protein interactions for RNA: ENST00000474837.5

SFMBT1-203, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 4

Gene SFMBT1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-203ENST00000474837 PRKCHP24723 683 aa16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 GRK6P43250 576 aa16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 GRIA4P48058 902 aa16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 HARS2P49590 506 aaKnown RBP16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 CSNK1EP49674 416 aaKnown RBP16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 BNC1Q01954 994 aa16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 CAMK2GQ13555 558 aaPredicted RBP16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 INAVAQ3KP66 663 aa16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 KMT5BQ4FZB7 885 aa16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 ATL3Q6DD88 541 aa16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 FAM124AQ86V42 546 aa16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 FAM217AQ8IXS0 508 aa16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 CCDC47Q96A33 483 aaKnown RBP16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 P2RY11Q96G91 374 aa16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 BTBD1Q9H0C5 482 aa16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 APOBEC3GQ9HC16 384 aaKnown RBP16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 TOR4AQ9NXH8 423 aa16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 TRAF3IP3Q9Y228 551 aa16.85■□□□□ 0.29
SFMBT1-203ENST00000474837 LAMA5O15230 3695 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 E9PAM4 449 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 DFNA5O60443 496 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 RPL13P26373 211 aaKnown RBP16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 GCLMP48507 274 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 CCT8P50990 548 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 YWHAGP61981 247 aaKnown RBP eCLIP16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 KIF19Q2TAC6 998 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 FNDC3BQ53EP0 1204 aaKnown RBP16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 CACUL1Q86Y37 369 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 GRAMD1CQ8IYS0 662 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 PDCD7Q8N8D1 485 aaKnown RBP16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 RBBP8NLQ8NC74 664 aaPredicted RBP16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 TAS1R2Q8TE23 839 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 GOLGA1Q92805 767 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 IGSF8Q969P0 613 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 PAGE5Q96GU1 130 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 SERTAD1Q9UHV2 236 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 CFAP45Q9UL16 551 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.84■□□□□ 0.293e-8■■■■■ 71.2
SFMBT1-203ENST00000474837 ANKRD6Q9Y2G4 727 aa16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.84■□□□□ 0.29
SFMBT1-203ENST00000474837 GOLGA8CPA6NN73 597 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 PCDHGA12O60330 932 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 DNTTP04053 509 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 C7P10643 843 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 NR2F2P24468 414 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 SFSWAPQ12872 951 aaKnown RBP16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 NFIL3Q16649 462 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 TTC31Q49AM3 519 aaPredicted RBP16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 ZNF394Q53GI3 561 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 RAB41Q5JT25 222 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 C1orf220Q5T0J3 134 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 ADAT2Q7Z6V5 191 aaKnown RBP16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 PIGZQ86VD9 579 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 SCUBE3Q8IX30 993 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 SORCS1Q8WY21 1168 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 SKA1Q96BD8 255 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 TMEM176AQ96HP8 235 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 LRIG1Q96JA1 1093 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 C6orf106Q9H6K1 298 aaPredicted RBP16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 SGK2Q9HBY8 427 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 TMEM8AQ9HCN3 771 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 TM9SF3Q9HD45 589 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 SUN2Q9UH99 717 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 USP25Q9UHP3 1055 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 CLEC4EQ9ULY5 219 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 SNX11Q9Y5W9 270 aa16.83■□□□□ 0.28
SFMBT1-203ENST00000474837 TRABD2BA6NFA1 517 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 SEMA4FO95754 770 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 LATS1O95835 1130 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 ZBED1O96006 694 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 ATP5BP06576 529 aaKnown RBP16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 HLA-EP13747 358 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 CD27P26842 260 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 GTF2H1P32780 548 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 ACSL1P33121 698 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 PSMC2P35998 433 aaKnown RBP16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 BCAT1P54687 386 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 CYP4F3Q08477 520 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 TRIP4Q15650 581 aaPredicted RBP16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 TMEM215Q68D42 235 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 ARHGAP17Q68EM7 881 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 KRT39Q6A163 491 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 AHI1Q8N157 1196 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 ZNF557Q8N988 423 aaPredicted RBP16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 ANKRD52Q8NB46 1076 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 RNF139Q8WU17 664 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 TMA16Q96EY4 203 aaKnown RBP16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 ARID3AQ99856 593 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 TMEM245Q9H330 911 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 NCKAP1Q9Y2A7 1128 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 HBS1LQ9Y450 684 aaKnown RBP16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 ADAMTS20P59510 1910 aa16.82■□□□□ 0.28
SFMBT1-203ENST00000474837 FREM2Q5SZK8 3169 aa16.81■□□□□ 0.28
SFMBT1-203ENST00000474837 ACTN4O43707 911 aaKnown RBP16.81■□□□□ 0.28
SFMBT1-203ENST00000474837 TSPAN3O60637 253 aa16.81■□□□□ 0.28
SFMBT1-203ENST00000474837 TRIM49P0CI25 452 aa16.81■□□□□ 0.28
SFMBT1-203ENST00000474837 TRIM49CP0CI26 452 aa16.81■□□□□ 0.28
SFMBT1-203ENST00000474837 CDK4P11802 303 aa16.81■□□□□ 0.28
SFMBT1-203ENST00000474837 HOXD9P28356 352 aaPredicted RBP16.81■□□□□ 0.28
SFMBT1-203ENST00000474837 HLA-FP30511 346 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms