RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 MAPK8P45983 427 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 BRCC3P46736 316 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 KPNA1P52294 538 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 YWHAEP62258 255 aaKnown RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 TNNC1P63316 161 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 CYP27A1Q02318 531 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 GFPT1Q06210 699 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 PON2Q15165 354 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 SPA17Q15506 151 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 TEAD2Q15562 447 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 SOWAHCQ53LP3 525 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 ZNF667Q5HYK9 610 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 C1orf228Q6PIY5 440 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 ALKAL1Q6UXT8 129 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 ANKS3Q6ZW76 656 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 PDZD4Q76G19 769 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 ZNF571Q7Z3V5 609 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 TRIM46Q7Z4K8 759 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 IRF2BP2Q7Z5L9 587 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 RALGPS2Q86X27 583 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 TCEAL8Q8IYN2 117 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 FAM71AQ8IYT1 594 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 RBBP8NLQ8NC74 664 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 ZNF461Q8TAF7 563 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 TTC8Q8TAM2 541 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 CXorf38Q8TB03 319 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 SHKBP1Q8TBC3 707 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 CSGALNACT1Q8TDX6 532 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 SLC20A1Q8WUM9 679 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 TAF4BQ92750 862 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 JAKMIP2Q96AA8 810 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 HPDLQ96IR7 371 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 ZNF560Q96MR9 790 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 PPP1R10Q96QC0 940 aaKnown RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 EIF3CQ99613 913 aaKnown RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 LRRC3Q9BY71 257 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 XYLT2Q9H1B5 865 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 SMYD3Q9H7B4 428 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 GOLGA2P5Q9HBQ8 144 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 TIMMDC1Q9NPL8 285 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 LZTFL1Q9NQ48 299 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 KCND1Q9NSA2 647 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 POLR3BQ9NW08 1133 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 NXF1Q9UBU9 619 aaKnown RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 UBQLN1Q9UMX0 589 aaKnown RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 AGAP1Q9UPQ3 857 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 PCDHB4Q9Y5E5 795 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 BZW2Q9Y6E2 419 aaKnown RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 KNL1Q8NG31 2342 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 GOLGA4Q13439 2230 aaKnown RBP6.72□□□□□ -1.33
HDAC1-205ENST00000472928 ZNF638Q14966 1978 aaKnown RBP6.72□□□□□ -1.33
HDAC1-205ENST00000472928 A0A087X0T9 212 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 SMIM28A0A1B0GU29 152 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 LNP1A1A4G5 178 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 FAM170AA1A519 330 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 BCLAF3A2AJT9 711 aaKnown RBP6.72□□□□□ -1.33
HDAC1-205ENST00000472928 GOLGA6L9A6NEM1 432 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 RECKO95980 971 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 CST3P01034 146 aaPredicted RBP6.72□□□□□ -1.33
HDAC1-205ENST00000472928 CALCAP01258 141 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 CAPNS1P04632 268 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 FAM228BP0C875 321 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 MYL4P12829 197 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 KCNE1P15382 129 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 CSRP1P21291 193 aaKnown RBP6.72□□□□□ -1.33
HDAC1-205ENST00000472928 ACO1P21399 889 aaKnown RBP6.72□□□□□ -1.33
HDAC1-205ENST00000472928 MSX1P28360 303 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 GNA15P30679 374 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 ATICP31939 592 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 IDH3AP50213 366 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 CLCNKBP51801 687 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 VAV2P52735 878 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 KRT83P78385 493 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 RBP5P82980 135 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 SOX4Q06945 474 aaPredicted RBP6.72□□□□□ -1.33
HDAC1-205ENST00000472928 TWF1Q12792 350 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 MYO1EQ12965 1108 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 MRPL58Q14197 206 aaKnown RBP6.72□□□□□ -1.33
HDAC1-205ENST00000472928 SLC18A3Q16572 532 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 UPP1Q16831 310 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 SGSM1Q2NKQ1 1148 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 ASTE1Q2TB18 679 aaPredicted RBP6.72□□□□□ -1.33
HDAC1-205ENST00000472928 ARHGAP29Q52LW3 1261 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 STXBP5Q5T5C0 1151 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 CYP4A22Q5TCH4 519 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 C9orf57Q5W0N0 161 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 KIAA1211LQ6NV74 962 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 TMEM270Q6UE05 265 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 NOP9Q86U38 636 aaKnown RBP6.72□□□□□ -1.33
HDAC1-205ENST00000472928 SLC47A2Q86VL8 602 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 TMC8Q8IU68 726 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 REXO1L1PQ8IX06 675 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 SYNPOQ8N3V7 929 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 LRRC52Q8N7C0 313 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 UBR7Q8N806 425 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 OLIG1Q8TAK6 271 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 CHFRQ96EP1 664 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 ZFYVE19Q96K21 471 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 TSPAN18Q96SJ8 248 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 DUSP15Q9H1R2 295 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms