RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 SAP25Q8TEE9 199 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 WBP2Q969T9 261 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 DHX58Q96C10 678 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 TRMT2BQ96GJ1 504 aaKnown RBP6.21□□□□□ -1.42
VARS-222ENST00000470953 DEPDC7Q96QD5 511 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 PYM1Q9BRP8 204 aaKnown RBP6.21□□□□□ -1.42
VARS-222ENST00000470953 PANK2Q9BZ23 570 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 HAPLN2Q9GZV7 340 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 GSX1Q9H4S2 264 aaPredicted RBP6.21□□□□□ -1.42
VARS-222ENST00000470953 RPF1Q9H9Y2 349 aaKnown RBP6.21□□□□□ -1.42
VARS-222ENST00000470953 BLOC1S4Q9NUP1 217 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 TBC1D7Q9P0N9 293 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 CFAP97Q9P2B7 532 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 TFIP11Q9UBB9 837 aaKnown RBP6.21□□□□□ -1.42
VARS-222ENST00000470953 SEL1LQ9UBV2 794 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 ENTPD4Q9Y227 616 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 STARD13Q9Y3M8 1113 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.21□□□□□ -1.42
VARS-222ENST00000470953 TTC26A0AVF1 554 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 LACTBL1A8MY62 500 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.2□□□□□ -1.42
VARS-222ENST00000470953 ZBTB24O43167 697 aaPredicted RBP6.2□□□□□ -1.42
VARS-222ENST00000470953 PPP6R2O75170 966 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 ADH1CP00326 375 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 WNT1P04628 370 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 ITGAVP06756 1048 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 CLTAP09496 248 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 ODC1P11926 461 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 CKMT2P17540 419 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 ACSL1P33121 698 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 DDIT3P35638 169 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 GRIA4P48058 902 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 RPL10AP62906 217 aaKnown RBP6.2□□□□□ -1.42
VARS-222ENST00000470953 ALCAMQ13740 583 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 EIF2S3LQ2VIR3 472 aaKnown RBP6.2□□□□□ -1.42
VARS-222ENST00000470953 ATL3Q6DD88 541 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 ADALQ6DHV7 355 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 SLFN12LQ6IEE8 588 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 FOXR1Q6PIV2 292 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 VASH2Q86V25 355 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 CEP57L1Q8IYX8 460 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 IQUBQ8NA54 791 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 LINC00301Q8NCQ3 95 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 C2orf15Q8WU43 125 aaKnown RBP6.2□□□□□ -1.42
VARS-222ENST00000470953 POMGNT1Q8WZA1 660 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 BIRC7Q96CA5 298 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 HVCN1Q96D96 273 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 P2RY11Q96G91 374 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 ACCSQ96QU6 501 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 TNMDQ9H2S6 317 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 CUEDC2Q9H467 287 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 CAAP1Q9H8G2 361 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 MAGEF1Q9HAY2 307 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 PANK4Q9NVE7 773 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 DEC1Q9P2X7 70 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.2□□□□□ -1.42
VARS-222ENST00000470953 R3HCC1Q9Y3T6 440 aaKnown RBP6.2□□□□□ -1.42
VARS-222ENST00000470953 PCDHB5Q9Y5E4 795 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 CPQQ9Y646 472 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 DCHS2Q6V1P9 2916 aa6.2□□□□□ -1.42
VARS-222ENST00000470953 DOCK9Q9BZ29 2069 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 WNT9AO14904 365 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 OGTO15294 1046 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 CYP26A1O43174 497 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 HOXC11O43248 304 aaPredicted RBP6.19□□□□□ -1.42
VARS-222ENST00000470953 HCRTO43612 131 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 IGLV3-19P01714 112 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 C4BPAP04003 597 aaKnown RBP6.19□□□□□ -1.42
VARS-222ENST00000470953 ABCB4P21439 1286 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 ACP1P24666 158 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 ZNF131P52739 623 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 COPAP53621 1224 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 SLC7A9P82251 487 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 DNM1Q05193 864 aaKnown RBP6.19□□□□□ -1.42
VARS-222ENST00000470953 GAD2Q05329 585 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 MCL1Q07820 350 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 TMEM132DQ14C87 1099 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 TEAD4Q15561 434 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 ANO4Q32M45 955 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 ARSHQ5FYA8 562 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 C9orf57Q5W0N0 161 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 SCARA3Q6AZY7 606 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 BORAQ6PGQ7 559 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 CLEC14AQ86T13 490 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 TMPRSS6Q8IU80 811 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 C9orf43Q8TAL5 461 aaPredicted RBP6.19□□□□□ -1.42
VARS-222ENST00000470953 CCDC47Q96A33 483 aaKnown RBP6.19□□□□□ -1.42
VARS-222ENST00000470953 CCDC34Q96HJ3 373 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 SPATA32Q96LK8 384 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 ELF4Q99607 663 aaPredicted RBP6.19□□□□□ -1.42
VARS-222ENST00000470953 PKMYT1Q99640 499 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 NTPCRQ9BSD7 190 aaKnown RBP6.19□□□□□ -1.42
VARS-222ENST00000470953 TMUB1Q9BVT8 246 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 OSGEPQ9NPF4 335 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 UXTQ9UBK9 157 aaPredicted RBP6.19□□□□□ -1.42
VARS-222ENST00000470953 TUBD1Q9UJT1 453 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 PHTF1Q9UMS5 762 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 UBQLN1Q9UMX0 589 aaKnown RBP6.19□□□□□ -1.42
VARS-222ENST00000470953 PCDHB13Q9Y5F0 798 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 STON1Q9Y6Q2 735 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms