RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 DBR1Q9UK59 544 aaKnown RBP10.25□□□□□ -0.77
NUP50-214ENST00000469163 CFL2Q9Y281 166 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.25□□□□□ -0.77
NUP50-214ENST00000469163 ADGRA3Q8IWK6 1321 aa10.25□□□□□ -0.77
NUP50-214ENST00000469163 DOCK3Q8IZD9 2030 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 TLR2O60603 784 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 P4HA1P13674 534 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 ZNF12P17014 697 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 MAPK4P31152 587 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 HOXA7P31268 230 aaPredicted RBP10.24□□□□□ -0.77
NUP50-214ENST00000469163 YARSP54577 528 aaKnown RBP10.24□□□□□ -0.77
NUP50-214ENST00000469163 PLCB3Q01970 1234 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 LRRC63Q05C16 580 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 TMC3Q7Z5M5 1100 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 ZBTB46Q86UZ6 589 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 TAS1R2Q8TE23 839 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 MKNK1Q9BUB5 465 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.24□□□□□ -0.77
NUP50-214ENST00000469163 SCPEP1Q9HB40 452 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 CYLDQ9NQC7 956 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 XPNPEP3Q9NQH7 507 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 PCSK1NQ9UHG2 260 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 PCDHB4Q9Y5E5 795 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 NID2Q14112 1375 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 SSC5DA1L4H1 1573 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 MYADML2A6NDP7 307 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 KLHL41O60662 606 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 CLASP2O75122 1294 aaKnown RBP10.24□□□□□ -0.77
NUP50-214ENST00000469163 TOMM70O94826 608 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 ARHGEF15O94989 841 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 GAS8O95995 478 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 PAHP00439 452 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 GLRA2P23416 452 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 MCCD1P59942 119 aaPredicted RBP10.24□□□□□ -0.77
NUP50-214ENST00000469163 KRT81Q14533 505 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 SLC9C1Q4G0N8 1177 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 EEF1DP3Q658K8 133 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 HGSNATQ68CP4 663 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 RNF43Q68DV7 783 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 AAGABQ6PD74 315 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 TMEM192Q8IY95 271 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 DNERQ8NFT8 737 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 BCL7CQ8WUZ0 217 aaPredicted RBP10.24□□□□□ -0.77
NUP50-214ENST00000469163 PTCD2Q8WV60 388 aaKnown RBP10.24□□□□□ -0.77
NUP50-214ENST00000469163 ZFPM2Q8WW38 1151 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 DEFB118Q96PH6 123 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 GPR20Q99678 358 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 ADPGKQ9BRR6 497 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 ABHD16BQ9H3Z7 469 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 EPB41L1Q9H4G0 881 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 RNF186Q9NXI6 227 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 C15orf38-AP3S2A0A0A6YYH1 394 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 CCND3P30281 292 aaPredicted RBP10.24□□□□□ -0.77
NUP50-214ENST00000469163 HADHAP40939 763 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 STAT1P42224 750 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 PHKA2P46019 1235 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 KRT6CP48668 564 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 NKX2-5P52952 324 aaPredicted RBP10.24□□□□□ -0.77
NUP50-214ENST00000469163 CDH8P55286 799 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 CCL23P55773 120 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 MAP2K5Q13163 448 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 DRAP1Q14919 205 aaPredicted RBP10.24□□□□□ -0.77
NUP50-214ENST00000469163 GRIK4Q16099 956 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 SGO2Q562F6 1265 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 NOL9Q5SY16 702 aaKnown RBP10.24□□□□□ -0.77
NUP50-214ENST00000469163 ABHD15Q6UXT9 468 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 ARPINQ7Z6K5 226 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 ZNF598Q86UK7 904 aaKnown RBP10.24□□□□□ -0.77
NUP50-214ENST00000469163 NDUFAF2Q8N183 169 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 ANKLE1Q8NAG6 615 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 OR6Y1Q8NGX8 325 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 LPPQ93052 612 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 TSNARE1Q96NA8 513 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 AP1M1Q9BXS5 423 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 MUC3BQ9H195 1237 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 CAAP1Q9H8G2 361 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 MAGEF1Q9HAY2 307 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 GOLGA2P5Q9HBQ8 144 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 FARSBQ9NSD9 589 aaKnown RBP10.24□□□□□ -0.77
NUP50-214ENST00000469163 SLC8A2Q9UPR5 921 aa10.24□□□□□ -0.77
NUP50-214ENST00000469163 I3L4J1 428 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 SNAI1O95863 264 aaPredicted RBP10.23□□□□□ -0.77
NUP50-214ENST00000469163 TFAP2AP05549 437 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 VEGFBP49765 207 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 RAB15P59190 212 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 MRPL28Q13084 256 aaKnown RBP10.23□□□□□ -0.77
NUP50-214ENST00000469163 FSCN1Q16658 493 aaKnown RBP10.23□□□□□ -0.77
NUP50-214ENST00000469163 IYDQ6PHW0 289 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 PAOXQ6QHF9 649 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 POTEHQ6S545 545 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 FAM161BQ96MY7 647 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 TLR10Q9BXR5 811 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 MINDY3Q9H8M7 445 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 XPNPEP1Q9NQW7 623 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 ANGPTL3Q9Y5C1 460 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 PCM1Q15154 2024 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 TMEM120BA0PK00 339 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 ENPP3O14638 875 aa10.23□□□□□ -0.77
NUP50-214ENST00000469163 TGFB1I1O43294 461 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms