RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 IL31Q6EBC2 164 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 SCUBE3Q8IX30 993 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 CLEC4CQ8WTT0 213 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 AZIN2Q96A70 460 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 TMA16Q96EY4 203 aaKnown RBP19.88■□□□□ 0.77
COL7A1-207ENST00000467985 CD248Q9HCU0 757 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 ELOVL2Q9NXB9 296 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 CALCOCO1Q9P1Z2 691 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 THAP10Q9P2Z0 257 aaPredicted RBP19.88■□□□□ 0.77
COL7A1-207ENST00000467985 STON1Q9Y6Q2 735 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 NUP205Q92621 2012 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 MED19A0JLT2 244 aaPredicted RBP19.87■□□□□ 0.77
COL7A1-207ENST00000467985 IRAK2O43187 625 aa19.87■□□□□ 0.77
COL7A1-207ENST00000467985 AP5Z1O43299 807 aa19.87■□□□□ 0.77
COL7A1-207ENST00000467985 USP8P40818 1118 aa19.87■□□□□ 0.77
COL7A1-207ENST00000467985 TBX4P57082 545 aa19.87■□□□□ 0.77
COL7A1-207ENST00000467985 NNTQ13423 1086 aa19.87■□□□□ 0.77
COL7A1-207ENST00000467985 GEN1Q17RS7 908 aa19.87■□□□□ 0.77
COL7A1-207ENST00000467985 MPP7Q5T2T1 576 aa19.87■□□□□ 0.77
COL7A1-207ENST00000467985 STPG1Q5TH74 334 aa19.87■□□□□ 0.77
COL7A1-207ENST00000467985 DENND1BQ6P3S1 775 aa19.87■□□□□ 0.77
COL7A1-207ENST00000467985 ZNF557Q8N988 423 aaPredicted RBP19.87■□□□□ 0.77
COL7A1-207ENST00000467985 SHC3Q92529 594 aa19.87■□□□□ 0.77
COL7A1-207ENST00000467985 SERPINB11Q96P15 392 aa19.87■□□□□ 0.77
COL7A1-207ENST00000467985 DDX50Q9BQ39 737 aaKnown RBP19.87■□□□□ 0.77
COL7A1-207ENST00000467985 SLC4A5Q9BY07 1137 aa19.87■□□□□ 0.77
COL7A1-207ENST00000467985 SMOC1Q9H4F8 434 aa19.87■□□□□ 0.77
COL7A1-207ENST00000467985 MBD1Q9UIS9 605 aaPredicted RBP19.87■□□□□ 0.77
COL7A1-207ENST00000467985 CNOT1A5YKK6 2376 aaKnown RBP19.86■□□□□ 0.77
COL7A1-207ENST00000467985 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 KHNYNO15037 678 aaKnown RBP19.86■□□□□ 0.77
COL7A1-207ENST00000467985 TSPAN3O60637 253 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 NDUFV2P19404 249 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 PON1P27169 355 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 HOXD9P28356 352 aaPredicted RBP19.86■□□□□ 0.77
COL7A1-207ENST00000467985 ARID5AQ03989 594 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 ENPP2Q13822 863 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 ARHGAP44Q17R89 818 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 DPCR1Q3MIW9 517 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 KIAA1211LQ6NV74 962 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 TMEM110Q86TL2 294 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 TMEFF1Q8IYR6 380 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 WFIKKN2Q8TEU8 576 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 FAM149B1Q96BN6 582 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 TLR6Q9Y2C9 796 aa19.86■□□□□ 0.77
COL7A1-207ENST00000467985 CAPN9O14815 690 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 SYNCRIPO60506 623 aaKnown RBP19.85■□□□□ 0.77
COL7A1-207ENST00000467985 MBD3O95983 291 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 FYNP06241 537 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 HOXD12P35452 270 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 RPL6Q02878 288 aaKnown RBP19.85■□□□□ 0.77
COL7A1-207ENST00000467985 LYSMD4Q5XG99 296 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 RNF43Q68DV7 783 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 GJB7Q6PEY0 223 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 SYT12Q8IV01 421 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 FRMD1Q8N878 549 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 DQX1Q8TE96 717 aaKnown RBP19.85■□□□□ 0.77
COL7A1-207ENST00000467985 PIGKQ92643 395 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 MRGPRX1Q96LB2 322 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 CIPCQ9C0C6 399 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 NDST4Q9H3R1 872 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 EVLQ9UI08 416 aaPredicted RBP19.85■□□□□ 0.77
COL7A1-207ENST00000467985 CLEC4EQ9ULY5 219 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 RAD54BQ9Y620 910 aa19.85■□□□□ 0.77
COL7A1-207ENST00000467985 TYW5A2RUC4 315 aaKnown RBP19.84■□□□□ 0.77
COL7A1-207ENST00000467985 BECN2A8MW95 431 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 WASH3PC4AMC7 463 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 E5RJQ4 531 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 ACSL4O60488 711 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 SNX16P57768 344 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 YWHAZP63104 245 aaKnown RBP19.84■□□□□ 0.77
COL7A1-207ENST00000467985 PTK2Q05397 1052 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 ZNF234Q14588 700 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 TCEAL6Q6IPX3 200 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 METTL3Q86U44 580 aaKnown RBP19.84■□□□□ 0.77
COL7A1-207ENST00000467985 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.84■□□□□ 0.77
COL7A1-207ENST00000467985 TCEAL3Q969E4 200 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 NOX5Q96PH1 765 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 TUBGCP2Q9BSJ2 902 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 EDEM2Q9BV94 578 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 POPDC2Q9HBU9 364 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 RXFP3Q9NSD7 469 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 PCDHGC3Q9UN70 934 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 NAALADL1Q9UQQ1 740 aa19.84■□□□□ 0.77
COL7A1-207ENST00000467985 IGHV1OR15-9A0A0B4J2B8 117 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 LNP1A1A4G5 178 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 PAPSS1O43252 624 aaPredicted RBP19.83■□□□□ 0.77
COL7A1-207ENST00000467985 IL12RB1P42701 662 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 PTGER3P43115 390 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 PDCLQ13371 301 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 FUT11Q495W5 492 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 VWA3BQ502W6 1294 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 FAM133BQ5BKY9 247 aaKnown RBP19.83■□□□□ 0.77
COL7A1-207ENST00000467985 PPM1JQ5JR12 505 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 PIK3R6Q5UE93 754 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 RABEPKQ7Z6M1 372 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 AHI1Q8N157 1196 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 HJURPQ8NCD3 748 aaPredicted RBP19.83■□□□□ 0.77
COL7A1-207ENST00000467985 FCRL2Q96LA5 508 aaPredicted RBP19.83■□□□□ 0.77
COL7A1-207ENST00000467985 LHX5Q9H2C1 402 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms