RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 HEY1Q9Y5J3 304 aa14.97□□□□□ -0.01
SEC16A-208ENST00000467838 SF3B1O75533 1304 aaKnown RBP eCLIP14.96□□□□□ -0.01
SEC16A-208ENST00000467838 ITM2AO43736 263 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 RNASEH1O60930 286 aaKnown RBP14.96□□□□□ -0.01
SEC16A-208ENST00000467838 SIN3BO75182 1162 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 ALDOAP04075 364 aaKnown RBP14.96□□□□□ -0.01
SEC16A-208ENST00000467838 ITGB3P05106 788 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 PRKCGP05129 697 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 NR2C2P49116 596 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 COPAP53621 1224 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 CCNIQ14094 377 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 PCLAFQ15004 111 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 DPYSL2Q16555 572 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 PKDCCQ504Y2 493 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 MAP1SQ66K74 1059 aaPredicted RBP14.96□□□□□ -0.01
SEC16A-208ENST00000467838 RNF111Q6ZNA4 994 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 LRRC71Q8N4P6 559 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.96□□□□□ -0.011e-6■■■□□ 16.9
SEC16A-208ENST00000467838 UBA3Q8TBC4 463 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 NLRP4Q96MN2 994 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 SORT1Q99523 831 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 TRIM56Q9BRZ2 755 aaKnown RBP14.96□□□□□ -0.01
SEC16A-208ENST00000467838 SPATA16Q9BXB7 569 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 GPATCH2LQ9NWQ4 482 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 HOXC10Q9NYD6 342 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 SSX2IPQ9Y2D8 614 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 LACTBL1A8MY62 500 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 ZNF195O14628 629 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 CASQ2O14958 399 aaPredicted RBP14.96□□□□□ -0.01
SEC16A-208ENST00000467838 TOP3BO95985 862 aaKnown RBP14.96□□□□□ -0.01
SEC16A-208ENST00000467838 ZFXP17010 805 aaPredicted RBP14.96□□□□□ -0.01
SEC16A-208ENST00000467838 GRK2P25098 689 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 PRDX6P30041 224 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 SLC1A6P48664 564 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 OSTNP61366 133 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 DYNC1I2Q13409 638 aaKnown RBP14.96□□□□□ -0.01
SEC16A-208ENST00000467838 CDO1Q16878 200 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 INSCQ1MX18 579 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 JADE1Q6IE81 842 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 KHSRPQ92945 711 aaKnown RBP eCLIP14.96□□□□□ -0.012e-6■□□□□ 8.5
SEC16A-208ENST00000467838 HEXIM2Q96MH2 286 aaKnown RBP14.96□□□□□ -0.01
SEC16A-208ENST00000467838 OLFM3Q96PB7 478 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 EBF3Q9H4W6 596 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 ASB7Q9H672 318 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 DMAP1Q9NPF5 467 aaPredicted RBP14.96□□□□□ -0.01
SEC16A-208ENST00000467838 EIF2B3Q9NR50 452 aaKnown RBP14.96□□□□□ -0.01
SEC16A-208ENST00000467838 TSPAN16Q9UKR8 245 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 APOBEC2Q9Y235 224 aaKnown RBP14.96□□□□□ -0.01
SEC16A-208ENST00000467838 MAD1L1Q9Y6D9 718 aa14.96□□□□□ -0.01
SEC16A-208ENST00000467838 GPR25O00155 361 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 PROCP04070 461 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 SETSIPP0DME0 302 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 MCF2P10911 925 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 CYP2F1P24903 491 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 HARS2P49590 506 aaKnown RBP14.95□□□□□ -0.02
SEC16A-208ENST00000467838 SLC25A3Q00325 362 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 MSLNQ13421 630 aaPredicted RBP14.95□□□□□ -0.02
SEC16A-208ENST00000467838 PDE1CQ14123 709 aaPredicted RBP14.95□□□□□ -0.02
SEC16A-208ENST00000467838 FAM187BQ17R55 369 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 LIN52Q52LA3 116 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 N4BP2L1Q5TBK1 243 aaPredicted RBP14.95□□□□□ -0.02
SEC16A-208ENST00000467838 DPY19L2Q6NUT2 758 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 PLPPR4Q7Z2D5 763 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 APOBEC3FQ8IUX4 373 aaKnown RBP14.95□□□□□ -0.02
SEC16A-208ENST00000467838 SLC25A41Q8N5S1 370 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 SHKBP1Q8TBC3 707 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 ISL2Q96A47 359 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 WRNIP1Q96S55 665 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 HAPLN3Q96S86 360 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 CENPKQ9BS16 269 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 C11orf84Q9BUA3 381 aaPredicted RBP14.95□□□□□ -0.02
SEC16A-208ENST00000467838 APOL6Q9BWW8 343 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 SLC4A5Q9BY07 1137 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 GGA3Q9NZ52 723 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 MORF4L1Q9UBU8 362 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 CDH22Q9UJ99 828 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 PLXNA1Q9UIW2 1896 aa14.95□□□□□ -0.02
SEC16A-208ENST00000467838 PEX1O43933 1283 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 LYPLA1O75608 230 aaPredicted RBP14.94□□□□□ -0.02
SEC16A-208ENST00000467838 AP1G2O75843 785 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 BAG2O95816 211 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 SDC4P31431 198 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 IDH3AP50213 366 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 NDST1P52848 882 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 POLE2P56282 527 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 HDAC4P56524 1084 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 RPL10AP62906 217 aaKnown RBP14.94□□□□□ -0.02
SEC16A-208ENST00000467838 ASPHQ12797 758 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 CNPY1Q3B7I2 92 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 FAM182AQ5T1J6 154 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 PACS1Q6VY07 963 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 ST13P4Q8IZP2 240 aaPredicted RBP14.94□□□□□ -0.02
SEC16A-208ENST00000467838 TMEM130Q8N3G9 435 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 PPP1R14CQ8TAE6 165 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 GPR20Q99678 358 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 NGRNQ9NPE2 291 aaKnown RBP14.94□□□□□ -0.02
SEC16A-208ENST00000467838 XPNPEP3Q9NQH7 507 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 DCDC2Q9UHG0 476 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 SOWAHBA6NEL2 793 aa14.94□□□□□ -0.02
SEC16A-208ENST00000467838 INO80B-WBP1J3KQ70 363 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms