RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 CPA5Q8WXQ8 436 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 EZH1Q92800 747 aaPredicted RBP18.22■□□□□ 0.51
CPSF4-209ENST00000465132 CD101Q93033 1021 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 ZC3H10Q96K80 434 aaKnown RBP18.22■□□□□ 0.51
CPSF4-209ENST00000465132 HHIPQ96QV1 700 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 SYT11Q9BT88 431 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 TMEM30AQ9NV96 361 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 CLIC5Q9NZA1 410 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 MYO16Q9Y6X6 1858 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 E5RJQ4 531 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 TCF3P15923 654 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 FECHP22830 423 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 PLA2G2CQ5R387 149 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 CCDC122Q5T0U0 273 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 SNX30Q5VWJ9 437 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 BTBD8Q5XKL5 378 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 IL31Q6EBC2 164 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 OR6B2Q6IFH4 312 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 ALKBH5Q6P6C2 394 aaKnown RBP18.21■□□□□ 0.51
CPSF4-209ENST00000465132 BEND5Q7L4P6 421 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 SYT13Q7L8C5 426 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 ZNF276Q8N554 614 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 WDTC1Q8N5D0 677 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 RPLP0P6Q8NHW5 317 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 SCAMP5Q8TAC9 235 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 SH3RF2Q8TEC5 729 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 RNF139Q8WU17 664 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 CPXM1Q96SM3 734 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 ULBP1Q9BZM6 244 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 NACA2Q9H009 215 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 MRPL47Q9HD33 250 aaKnown RBP18.21■□□□□ 0.51
CPSF4-209ENST00000465132 ABCC13Q9NSE7 274 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 LCMT1Q9UIC8 334 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 NAGPAQ9UK23 515 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 ARHGAP26Q9UNA1 814 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 PCDHGA5Q9Y5G8 931 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 SCINQ9Y6U3 715 aa18.21■□□□□ 0.51
CPSF4-209ENST00000465132 RALGAPA1Q6GYQ0 2036 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 ACACBO00763 2458 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 DDX3XO00571 662 aaKnown RBP eCLIP18.2■□□□□ 0.5
CPSF4-209ENST00000465132 CAPN9O14815 690 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 HSF2BPO75031 334 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 FTLP02792 175 aaPredicted RBP18.2■□□□□ 0.5
CPSF4-209ENST00000465132 HDCP19113 662 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 DAOAP59103 153 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 YWHAZP63104 245 aaKnown RBP18.2■□□□□ 0.5
CPSF4-209ENST00000465132 KRT83P78385 493 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 SLC6A3Q01959 620 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 PLK5Q496M5 336 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 HECTD3Q5T447 861 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 SCUBE3Q8IX30 993 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 ACDQ96AP0 544 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 ISCUQ9H1K1 167 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 LINC00597Q9H2U6 94 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 RXFP3Q9NSD7 469 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 RRN3Q9NYV6 651 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 EPG5Q9HCE0 2579 aa18.2■□□□□ 0.5
CPSF4-209ENST00000465132 TULP2O00295 520 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 TM4SF5O14894 197 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 APBB3O95704 486 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 ABL1P00519 1130 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 LTFP02788 710 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 GSCP56915 257 aaPredicted RBP18.19■□□□□ 0.5
CPSF4-209ENST00000465132 YWHAGP61981 247 aaKnown RBP eCLIP18.19■□□□□ 0.5
CPSF4-209ENST00000465132 GOLGA8FQ08AF8 430 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 GOLGA8DPQ0D2H9 430 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 NR1H3Q13133 447 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 DMC1Q14565 340 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 PTPN20Q4JDL3 420 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 MMS22LQ6ZRQ5 1243 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 RSRC2Q7L4I2 434 aaKnown RBP18.19■□□□□ 0.5
CPSF4-209ENST00000465132 ARCQ7LC44 396 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 GPRIN1Q7Z2K8 1008 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 CTNNBL1Q8WYA6 563 aaPredicted RBP18.19■□□□□ 0.5
CPSF4-209ENST00000465132 FAM149B1Q96BN6 582 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 PDLIM2Q96JY6 352 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 PCDHB18PQ96TA0 734 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 C11orf70Q9BRQ4 267 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 DUSP15Q9H1R2 295 aaPredicted RBP18.19■□□□□ 0.5
CPSF4-209ENST00000465132 POPDC2Q9HBU9 364 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 PARVAQ9NVD7 372 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 EBF1Q9UH73 591 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 CYTH4Q9UIA0 394 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 INTUQ9ULD6 942 aa18.19■□□□□ 0.5
CPSF4-209ENST00000465132 A0A087X0T9 212 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 ZNF840PA6NDX5 716 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 TMCO5BA8MYB1 307 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 EIF3CLB5ME19 914 aaKnown RBP18.18■□□□□ 0.5
CPSF4-209ENST00000465132 ARHGAP6O43182 974 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 KRT37O76014 449 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 NFATC1O95644 943 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 PLEKP08567 350 aaPredicted RBP18.18■□□□□ 0.5
CPSF4-209ENST00000465132 H2AFZP0C0S5 128 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 ZDHHC11BP0C7U3 371 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 FAM228BP0C875 321 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 KCNA4P22459 653 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 ATP5C1P36542 298 aaKnown RBP18.18■□□□□ 0.5
CPSF4-209ENST00000465132 MPLP40238 635 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 USP46P62068 366 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 ASTE1Q2TB18 679 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms