RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 SF3A3Q12874 501 aaKnown RBP eCLIP3.89□□□□□ -1.79
RFC4-211ENST00000460408 SEMA3BQ13214 749 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 EFR3AQ14156 821 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 AAK1Q2M2I8 961 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 TBC1D25Q3MII6 688 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 GALNTL6Q49A17 601 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 HSP90AB4PQ58FF6 505 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 FBXO47Q5MNV8 452 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 L1TD1Q5T7N2 865 aaKnown RBP3.89□□□□□ -1.79
RFC4-211ENST00000460408 ACSM6Q6P461 480 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 C16orf89Q6UX73 402 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 CYP26C1Q6V0L0 522 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 BCDIN3DQ7Z5W3 292 aaKnown RBP3.89□□□□□ -1.79
RFC4-211ENST00000460408 ZNF354CQ86Y25 554 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 ANKRD18AQ8IVF6 992 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 SDCCAG3Q96C92 435 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 REPS1Q96D71 796 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 TIMP4Q99727 224 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 MACROD1Q9BQ69 325 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 FAM167BQ9BTA0 163 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 ABHD16BQ9H3Z7 469 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 G6PC2Q9NQR9 355 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 SNX15Q9NRS6 342 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 GAR1Q9NY12 217 aaKnown RBP3.89□□□□□ -1.79
RFC4-211ENST00000460408 ASIC5Q9NY37 505 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 SEMA5BQ9P283 1151 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 KIF17Q9P2E2 1029 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 PGAP2Q9UHJ9 254 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 CCNL1Q9UK58 526 aaPredicted RBP3.89□□□□□ -1.79
RFC4-211ENST00000460408 ADAM21Q9UKJ8 722 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 GJD2Q9UKL4 321 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 UBE2J1Q9Y385 318 aaPredicted RBP3.89□□□□□ -1.79
RFC4-211ENST00000460408 PCDHB7Q9Y5E2 793 aa3.89□□□□□ -1.79
RFC4-211ENST00000460408 FAM90A20PA6NIJ5 464 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 CGB1A6NKQ9 187 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 NKX2-8O15522 239 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 ORC4O43929 436 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 LARGE1O95461 756 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 TK1P04183 234 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 TMIGD3P0DMS9 266 aaPredicted RBP3.88□□□□□ -1.79
RFC4-211ENST00000460408 ATF7P17544 494 aaPredicted RBP3.88□□□□□ -1.79
RFC4-211ENST00000460408 WT1P19544 449 aaPredicted RBP3.88□□□□□ -1.79
RFC4-211ENST00000460408 MMP8P22894 467 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 ZNF81P51508 661 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 RAE1P78406 368 aaKnown RBP3.88□□□□□ -1.79
RFC4-211ENST00000460408 TXNL4AP83876 142 aaKnown RBP3.88□□□□□ -1.79
RFC4-211ENST00000460408 BFSP2Q13515 415 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 CUL4BQ13620 913 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 SMAD1Q15797 465 aaKnown RBP3.88□□□□□ -1.79
RFC4-211ENST00000460408 P3H1Q32P28 736 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 PCID2Q5JVF3 399 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 KIRREL2Q6UWL6 708 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 RRAGAQ7L523 313 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 ZNF804AQ7Z570 1209 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 GRASPQ7Z6J2 395 aaPredicted RBP3.88□□□□□ -1.79
RFC4-211ENST00000460408 ARHGEF25Q86VW2 580 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 P3H2Q8IVL5 708 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 C12orf76Q8N812 135 aaPredicted RBP3.88□□□□□ -1.79
RFC4-211ENST00000460408 OR52L2PQ8NGH6 319 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 OR6Y1Q8NGX8 325 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 GLMPQ8WWB7 406 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 TRIM63Q969Q1 353 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 UBXN10Q96LJ8 280 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 TRAPPC9Q96Q05 1148 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 SNX18Q96RF0 628 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 MMS19Q96T76 1030 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 SLC29A3Q9BZD2 475 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 CDCP1Q9H5V8 836 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 ELAC1Q9H777 363 aaKnown RBP3.88□□□□□ -1.79
RFC4-211ENST00000460408 FBXO28Q9NVF7 368 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 FZD4Q9ULV1 537 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 PCDHB2Q9Y5E7 798 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 KAT6AQ92794 2004 aa3.88□□□□□ -1.79
RFC4-211ENST00000460408 EFCAB8A8MWE9 144 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 H3BNC9 293 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 EIF3FO00303 357 aaPredicted RBP3.87□□□□□ -1.79
RFC4-211ENST00000460408 NCAM2O15394 837 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 CKMT1AP12532 417 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 MATN1P21941 496 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 SERPINA4P29622 427 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 GALNSP34059 522 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 THBS4P35443 961 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 IGHMBP2P38935 993 aaKnown RBP3.87□□□□□ -1.79
RFC4-211ENST00000460408 FOXL2P58012 376 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 RPL15P61313 204 aaKnown RBP3.87□□□□□ -1.79
RFC4-211ENST00000460408 CFHR3Q02985 330 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 CCDC15Q0P6D6 951 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 DENND2CQ68D51 928 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 DGAT2L7PQ6IED9 249 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 LVRNQ6Q4G3 990 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 KRT27Q7Z3Y8 459 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 ANKS1BQ7Z6G8 1248 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 RASAL3Q86YV0 1011 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 FTSJ3Q8IY81 847 aaKnown RBP3.87□□□□□ -1.79
RFC4-211ENST00000460408 ZNF366Q8N895 744 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 TERB1Q8NA31 727 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 NGDNQ8NEJ9 315 aaKnown RBP3.87□□□□□ -1.79
RFC4-211ENST00000460408 SLC2A12Q8TD20 617 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 CSGALNACT1Q8TDX6 532 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 HMGB4Q8WW32 186 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms