RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CES3Q6UWW8 571 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 APLFQ8IW19 511 aaPredicted RBP15.15■□□□□ 0.02
PTPRU-205ENST00000460170 ZNF333Q96JL9 665 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 ARMCX1Q9P291 453 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 SH3BP1Q9Y3L3 701 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 MYPNQ86TC9 1320 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 CNTNAP2Q9UHC6 1331 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 CFAP99D6REC4 459 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 TPST1O60507 370 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 ARHGEF7Q14155 803 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 KCTD19Q17RG1 926 aaPredicted RBP15.15■□□□□ 0.02
PTPRU-205ENST00000460170 SYTL3Q4VX76 610 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 TAF2Q6P1X5 1199 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 PLPPR4Q7Z2D5 763 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 FHDC1Q9C0D6 1143 aaPredicted RBP15.15■□□□□ 0.02
PTPRU-205ENST00000460170 CRLS1Q9UJA2 301 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 BLOC1S6Q9UL45 172 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 KPNA6O60684 536 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 DDHD2O94830 711 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 CDH2P19022 906 aaPredicted RBP15.15■□□□□ 0.02
PTPRU-205ENST00000460170 MMP13P45452 471 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 PLOD1Q02809 727 aaPredicted RBP15.15■□□□□ 0.02
PTPRU-205ENST00000460170 NAB1Q13506 487 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 CTXN3Q4LDR2 81 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 SGO1Q5FBB7 561 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 MARC1Q5VT66 337 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 KIAA0319LQ8IZA0 1049 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 SMARCD1Q96GM5 515 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 SIKE1Q9BRV8 207 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 POPDC2Q9HBU9 364 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 DYRK4Q9NR20 520 aa15.15■□□□□ 0.02
PTPRU-205ENST00000460170 A0A0B4J269 797 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 SLC12A8A0AV02 714 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 TSHRP16473 764 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 MFSD10Q14728 455 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 AARS2Q5JTZ9 985 aaKnown RBP15.14■□□□□ 0.01
PTPRU-205ENST00000460170 FAM183BPQ6ZVS7 135 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 INPP5DQ92835 1189 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 FOPNLQ96NB1 174 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 PRDM16Q9HAZ2 1276 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 PDGFCQ9NRA1 345 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 ATP6V1B1P15313 513 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 YBX3P16989 372 aaKnown RBP eCLIP15.14■□□□□ 0.01
PTPRU-205ENST00000460170 SREBF2Q12772 1141 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 TBL3Q12788 808 aaKnown RBP15.14■□□□□ 0.01
PTPRU-205ENST00000460170 ZCCHC23Q6ZST2 131 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 ST6GALNAC4Q9H4F1 302 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 H0Y626 953 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 ZCCHC18P0CG32 403 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 CDK7P50613 346 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 ZBTB17Q13105 803 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 PTK2BQ14289 1009 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 WLSQ5T9L3 541 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 IZUMO2Q6UXV1 221 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 LZTR1Q8N653 840 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 TEKT4Q8WW24 435 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 VAT1Q99536 393 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 SH3GL2Q99962 352 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 EIF2AQ9BY44 585 aaKnown RBP15.14■□□□□ 0.01
PTPRU-205ENST00000460170 SYTL2Q9HCH5 934 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 NOS2P35228 1153 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 ACVR2BQ13705 512 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 PDK4Q16654 411 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 PARP6Q2NL67 630 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 SNX30Q5VWJ9 437 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 ABHD15Q6UXT9 468 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 KYQ8NBH2 561 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 KAT2BQ92831 832 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 USP13Q92995 863 aaPredicted RBP15.14■□□□□ 0.01
PTPRU-205ENST00000460170 SNRNP25Q9BV90 132 aaKnown RBP15.14■□□□□ 0.01
PTPRU-205ENST00000460170 C15orf41Q9Y2V0 281 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 SPEF2Q9C093 1822 aa15.14■□□□□ 0.01
PTPRU-205ENST00000460170 TMEM191CA6NGB0 347 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 POMCP01189 267 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 PSMA4P25789 261 aaKnown RBP15.13■□□□□ 0.01
PTPRU-205ENST00000460170 SLC34A1Q06495 639 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 CDH18Q13634 790 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 TLK2Q86UE8 772 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 HELQQ8TDG4 1101 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 GFM2Q969S9 779 aaKnown RBP15.13■□□□□ 0.01
PTPRU-205ENST00000460170 CDCA5Q96FF9 252 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 RBBP8Q99708 897 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 C17orf80Q9BSJ5 609 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 CAAP1Q9H8G2 361 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 KCNK4Q9NYG8 393 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 NRXN3Q9Y4C0 1643 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 A0A0A0MRY4 1105 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 IRF6O14896 467 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 GLP2RO95838 553 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 ATP5BP06576 529 aaKnown RBP15.13■□□□□ 0.01
PTPRU-205ENST00000460170 ALDH7A1P49419 539 aaKnown RBP15.13■□□□□ 0.01
PTPRU-205ENST00000460170 OXCT1P55809 520 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 TTLL9Q3SXZ7 439 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 RNF43Q68DV7 783 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 IQSEC1Q6DN90 963 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 ILDR2Q71H61 639 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 PTAR1Q7Z6K3 402 aaPredicted RBP15.13■□□□□ 0.01
PTPRU-205ENST00000460170 PALB2Q86YC2 1186 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 SNX31Q8N9S9 440 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 FAM136AQ96C01 138 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms