RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 DAPP1Q9UN19 280 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 MORC2Q9Y6X9 1032 aaPredicted RBP7.12□□□□□ -1.27
CKAP2-204ENST00000459902 IPO5O00410 1097 aaKnown RBP7.11□□□□□ -1.27
CKAP2-204ENST00000459902 PRKCGP05129 697 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 CYP2A6P11509 494 aaPredicted RBP7.11□□□□□ -1.27
CKAP2-204ENST00000459902 THBS4P35443 961 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 AAK1Q2M2I8 961 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 RANBP10Q6VN20 620 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 PTF1AQ7RTS3 328 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 PNISRQ8TF01 805 aaKnown RBP7.11□□□□□ -1.27
CKAP2-204ENST00000459902 TRAPPC12Q8WVT3 735 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 REXO5Q96IC2 774 aaKnown RBP7.11□□□□□ -1.27
CKAP2-204ENST00000459902 HIC2Q96JB3 615 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 CRAMP1Q96RY5 1269 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 HERPUD2Q9BSE4 406 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 PAGR1Q9BTK6 254 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 ELOVL1Q9BW60 279 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 TMEM120AQ9BXJ8 343 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 MYLK2Q9H1R3 596 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 CCDC134Q9H6E4 229 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 ZBTB1Q9Y2K1 713 aa7.11□□□□□ -1.27
CKAP2-204ENST00000459902 C16orf96A6NNT2 1141 aa7.1□□□□□ -1.27
CKAP2-204ENST00000459902 NKX2-8O15522 239 aa7.1□□□□□ -1.27
CKAP2-204ENST00000459902 RBMXL2O75526 392 aaKnown RBP7.1□□□□□ -1.27
CKAP2-204ENST00000459902 AGTR2P50052 363 aa7.1□□□□□ -1.27
CKAP2-204ENST00000459902 SF3A3Q12874 501 aaKnown RBP eCLIP7.1□□□□□ -1.27
CKAP2-204ENST00000459902 CBFBQ13951 182 aa7.1□□□□□ -1.27
CKAP2-204ENST00000459902 POSTNQ15063 836 aa7.1□□□□□ -1.27
CKAP2-204ENST00000459902 TIGD6Q17RP2 521 aa7.1□□□□□ -1.27
CKAP2-204ENST00000459902 CERKLQ49MI3 558 aaPredicted RBP7.1□□□□□ -1.27
CKAP2-204ENST00000459902 ANKRD40Q6AI12 368 aa7.1□□□□□ -1.27
CKAP2-204ENST00000459902 NFRKBQ6P4R8 1299 aa7.1□□□□□ -1.27
CKAP2-204ENST00000459902 AKAP1Q92667 903 aaKnown RBP eCLIP7.1□□□□□ -1.27
CKAP2-204ENST00000459902 FAR2Q96K12 515 aa7.1□□□□□ -1.27
CKAP2-204ENST00000459902 DDX23Q9BUQ8 820 aaKnown RBP7.1□□□□□ -1.27
CKAP2-204ENST00000459902 TMEM232C9JQI7 657 aa7.09□□□□□ -1.27
CKAP2-204ENST00000459902 PRYO14603 147 aa7.09□□□□□ -1.27
CKAP2-204ENST00000459902 EIF3JO75822 258 aaKnown RBP7.09□□□□□ -1.27
CKAP2-204ENST00000459902 LATS1O95835 1130 aa7.09□□□□□ -1.27
CKAP2-204ENST00000459902 PEPDP12955 493 aa7.09□□□□□ -1.27
CKAP2-204ENST00000459902 FAM3BP58499 235 aaPredicted RBP7.09□□□□□ -1.27
CKAP2-204ENST00000459902 RPL15P61313 204 aaKnown RBP7.09□□□□□ -1.27
CKAP2-204ENST00000459902 DHX8Q14562 1220 aaKnown RBP7.09□□□□□ -1.27
CKAP2-204ENST00000459902 CNGA3Q16281 694 aa7.09□□□□□ -1.27
CKAP2-204ENST00000459902 ZNF569Q5MCW4 686 aa7.09□□□□□ -1.27
CKAP2-204ENST00000459902 ZNF66Q6ZN08 573 aa7.09□□□□□ -1.27
CKAP2-204ENST00000459902 RAB11FIP2Q7L804 512 aa7.09□□□□□ -1.27
CKAP2-204ENST00000459902 C8orf58Q8NAV2 365 aa7.09□□□□□ -1.27
CKAP2-204ENST00000459902 ZNF398Q8TD17 642 aa7.09□□□□□ -1.27
CKAP2-204ENST00000459902 HMGB4Q8WW32 186 aa7.09□□□□□ -1.27
CKAP2-204ENST00000459902 TRMT61AQ96FX7 289 aaKnown RBP7.09□□□□□ -1.27
CKAP2-204ENST00000459902 RNF26Q9BY78 433 aaPredicted RBP7.09□□□□□ -1.27
CKAP2-204ENST00000459902 BRD8Q9H0E9 1235 aa7.09□□□□□ -1.27
CKAP2-204ENST00000459902 SRP68Q9UHB9 627 aaKnown RBP7.09□□□□□ -1.27
CKAP2-204ENST00000459902 RAB21Q9UL25 225 aa7.09□□□□□ -1.27
CKAP2-204ENST00000459902 HEMK1Q9Y5R4 338 aaPredicted RBP7.09□□□□□ -1.27
CKAP2-204ENST00000459902 TTC34A8MYJ7 566 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 LARGE1O95461 756 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 SFPQP23246 707 aaKnown RBP eCLIP7.08□□□□□ -1.28
CKAP2-204ENST00000459902 NDUFS1P28331 727 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 PRKG1Q13976 671 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 KPNB1Q14974 876 aaKnown RBP7.08□□□□□ -1.28
CKAP2-204ENST00000459902 SEC23BQ15437 767 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 CC2D1BQ5T0F9 858 aaKnown RBP7.08□□□□□ -1.28
CKAP2-204ENST00000459902 TTC22Q5TAA0 569 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 SMC5Q8IY18 1101 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 LAS2Q8IYD9 372 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 GALNT15Q8N3T1 639 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 ANKRD42Q8N9B4 389 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 SPATA5Q8NB90 893 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 TBC1D20Q96BZ9 403 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 ZNF764Q96H86 408 aaPredicted RBP7.08□□□□□ -1.28
CKAP2-204ENST00000459902 C5orf34Q96MH7 638 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 EFHD1Q9BUP0 239 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 ELAC1Q9H777 363 aaKnown RBP7.08□□□□□ -1.28
CKAP2-204ENST00000459902 PTGFRNQ9P2B2 879 aa7.08□□□□□ -1.28
CKAP2-204ENST00000459902 ARID4BQ4LE39 1312 aaPredicted RBP7.07□□□□□ -1.28
CKAP2-204ENST00000459902 HMX3A6NHT5 357 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 SLC38A8A6NNN8 435 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 EFCAB8A8MWE9 144 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 KAT7O95251 611 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 HOXD12P35452 270 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 STAT6P42226 847 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 VPS41P49754 854 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 FOXL2P58012 376 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 SLC10A2Q12908 348 aaPredicted RBP7.07□□□□□ -1.28
CKAP2-204ENST00000459902 PFKFB3Q16875 520 aaPredicted RBP7.07□□□□□ -1.28
CKAP2-204ENST00000459902 INO80DQ53TQ3 878 aaPredicted RBP7.07□□□□□ -1.28
CKAP2-204ENST00000459902 RRAGAQ7L523 313 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 TRAPPC9Q96Q05 1148 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 NUAK2Q9H093 628 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 LIN7CQ9NUP9 197 aaKnown RBP7.07□□□□□ -1.28
CKAP2-204ENST00000459902 ASNSD1Q9NWL6 643 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 TRPC5Q9UL62 973 aaPredicted RBP7.07□□□□□ -1.28
CKAP2-204ENST00000459902 C19orf53Q9UNZ5 99 aaPredicted RBP7.07□□□□□ -1.28
CKAP2-204ENST00000459902 SLC12A4Q9UP95 1085 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 B3GNT3Q9Y2A9 372 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 PCDHGB3Q9Y5G1 929 aa7.07□□□□□ -1.28
CKAP2-204ENST00000459902 PPFIA2O75334 1257 aa7.06□□□□□ -1.28
CKAP2-204ENST00000459902 SLC3A2P08195 630 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms