RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 ERMARDQ5T6L9 678 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 TTC23Q5W5X9 447 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 NAPEPLDQ6IQ20 393 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 RWDD4Q6NW29 188 aaKnown RBP10.02□□□□□ -0.81
UFD1-205ENST00000459854 AKAP14Q86UN6 197 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 DHFR2Q86XF0 187 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 AADATQ8N5Z0 425 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 CKAP2Q8WWK9 683 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 OSBPL11Q9BXB4 747 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 MYLK2Q9H1R3 596 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 ABHD16BQ9H3Z7 469 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 SELENONQ9NZV5 590 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 RBPJLQ9UBG7 517 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 PAPPA2Q9BXP8 1791 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 SF3B1O75533 1304 aaKnown RBP eCLIP10.02□□□□□ -0.811e-6■■■■■ 75.7
UFD1-205ENST00000459854 SERPINE1P05121 402 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 TCN1P20061 433 aaPredicted RBP10.02□□□□□ -0.81
UFD1-205ENST00000459854 CCNA2P20248 432 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 ACAT1P24752 427 aaKnown RBP10.02□□□□□ -0.81
UFD1-205ENST00000459854 CTTNQ14247 550 aaKnown RBP10.02□□□□□ -0.81
UFD1-205ENST00000459854 FAM102AQ5T9C2 384 aaPredicted RBP10.02□□□□□ -0.81
UFD1-205ENST00000459854 CACHD1Q5VU97 1274 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 EXOC3L1Q86VI1 746 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 TBC1D19Q8N5T2 526 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 PXMP2Q9NR77 195 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 MAGED2Q9UNF1 606 aaPredicted RBP10.02□□□□□ -0.81
UFD1-205ENST00000459854 SAGE2PA6NJ88 616 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 SORBS3O60504 671 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 TSC22D2O75157 780 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 MPOP05164 745 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 FDPSP14324 419 aaKnown RBP10.01□□□□□ -0.81
UFD1-205ENST00000459854 TRAF2Q12933 501 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 PRKAA1Q13131 559 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 CBX3Q13185 183 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 EPHA7Q15375 998 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 RBM20Q5T481 1227 aaKnown RBP10.01□□□□□ -0.81
UFD1-205ENST00000459854 IFNEQ86WN2 208 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 DEFB107AQ8IZN7 70 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 OR6J1Q8NGC5 347 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 OXER1Q8TDS5 423 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 CYLDQ9NQC7 956 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 SAGE1Q9NXZ1 904 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 PCSK1NQ9UHG2 260 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 NAGPAQ9UK23 515 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 KBTBD13C9JR72 458 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 GUCA1CO95843 209 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 VAV1P15498 845 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 NOVP48745 357 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 MXD4Q14582 209 aaPredicted RBP10.01□□□□□ -0.81
UFD1-205ENST00000459854 KCTD21Q4G0X4 260 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 CDKAL1Q5VV42 579 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 MZT2AQ6P582 158 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 MOXD1Q6UVY6 613 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 RINLQ6ZS11 566 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 SLC22A9Q8IVM8 553 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 EID3Q8N140 333 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 CD99L2Q8TCZ2 262 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 GIPC3Q8TF64 312 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 ELMO2Q96JJ3 720 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 MXRA8Q9BRK3 442 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 DOCK2Q92608 1830 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 POTEMA6NI47 508 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 PIK3CDO00329 1044 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 MSCO60682 206 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 EPHB2P29323 1055 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 PKN1Q16512 942 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 THEMIS2Q5TEJ8 643 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 ZNF746Q6NUN9 644 aaPredicted RBP10.01□□□□□ -0.81
UFD1-205ENST00000459854 KLHL17Q6TDP4 642 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 DHDDSQ86SQ9 333 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 OR6P1Q8NGX9 317 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 HES6Q96HZ4 224 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 APOPT1Q96IL0 206 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 SPATA33Q96N06 139 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 PDCD2LQ9BRP1 358 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 DHX35Q9H5Z1 703 aaKnown RBP10.01□□□□□ -0.81
UFD1-205ENST00000459854 GJB4Q9NTQ9 266 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 GIN1Q9NXP7 522 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 INPP5FQ9Y2H2 1132 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 CYP26A1O43174 497 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 GAS2O43903 313 aaKnown RBP10.01□□□□□ -0.81
UFD1-205ENST00000459854 IL6P05231 212 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 RBP1P09455 135 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 WARSP23381 471 aaKnown RBP10.01□□□□□ -0.81
UFD1-205ENST00000459854 SREBF1P36956 1147 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 RGS4P49798 205 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 CCT8P50990 548 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 TSNQ15631 228 aaKnown RBP10.01□□□□□ -0.81
UFD1-205ENST00000459854 MAPK6Q16659 721 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 NEK10Q6ZWH5 1172 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 RNF180Q86T96 592 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 CYP4Z1Q86W10 505 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 RDM1Q8NG50 284 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 BHMTQ93088 406 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 MS4A4AQ96JQ5 239 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 DYRK4Q9NR20 520 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 KRT84Q9NSB2 600 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 GALNT8Q9NY28 637 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 DMGDHQ9UI17 866 aaKnown RBP10.01□□□□□ -0.81
UFD1-205ENST00000459854 VAV3Q9UKW4 847 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms