RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 XPO7Q9UIA9 1087 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 REXO2Q9Y3B8 237 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 HEMK1Q9Y5R4 338 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 NUMBLQ9Y6R0 609 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 MYH13Q9UKX3 1938 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 RGPD1P0DJD0 1748 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 BAHCC1Q9P281 2608 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 MROH7-TTC4A0A0A0MT08 1334 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 MOXD2PA6NHM9 499 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 C16orf96A6NNT2 1141 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 HNRNPCL2B2RXH8 293 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ERVV-1B6SEH8 477 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 USP17L10C9JJH3 530 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 KLRF2D3W0D1 207 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CCDC188H7C350 402 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 FOXN3O00409 490 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 DNALI1O14645 258 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 VILLO15195 856 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 RAD51BO15315 384 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ARHGEF9O43307 516 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 GPC4O75487 556 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PALMO75781 387 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 DGAT1O75907 488 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 FKBP9O95302 570 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ACSL3O95573 720 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 DLGAP3O95886 979 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 COL6A1P12109 1028 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ACTN1P12814 892 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PLCG1P19174 1290 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CD53P19397 219 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ITIH1P19827 911 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 FGFR4P22455 802 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 RPA1P27694 616 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ADD1P35611 737 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 NR4A2P43354 598 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 NAMPTP43490 491 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 SERPINH1P50454 418 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 SLC12A2P55011 1212 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 P2RX3P56373 397 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 GPR85P60893 370 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TAP1Q03518 808 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ARID5AQ03989 594 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 LRRC63Q05C16 580 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CD300CQ08708 224 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 SMARCB1Q12824 385 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 DLG1Q12959 904 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 RAPGEF1Q13905 1077 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TRIM25Q14258 630 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 SNX17Q15036 470 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 NECTIN1Q15223 517 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ARHGAP44Q17R89 818 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PGS1Q32NB8 556 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 RILPL1Q5EBL4 403 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TCP11X2Q5H9J9 407 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 RARS2Q5T160 578 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 LPCAT4Q643R3 524 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 SCARA3Q6AZY7 606 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 HMBOX1Q6NT76 420 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 XKR5Q6UX68 686 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PLEKHM3Q6ZWE6 761 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 HEATR3Q7Z4Q2 680 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 RNF180Q86T96 592 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TMEM151BQ8IW70 566 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 LSMEM2Q8N112 164 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 LRRC71Q8N4P6 559 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ASCC1Q8N9N2 400 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 ASB12Q8WXK4 309 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PBXIP1Q96AQ6 731 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 FAM84BQ96KN1 310 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 CEP19Q96LK0 163 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 C1orf74Q96LT6 269 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 FAM227BQ96M60 508 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TTC25Q96NG3 672 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TM9SF2Q99805 663 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ZKSCAN3Q9BRR0 538 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TRIM56Q9BRZ2 755 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 TRIM15Q9C019 465 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 KMT5AQ9NQR1 393 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ECHDC1Q9NTX5 307 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 GDAP2Q9NXN4 497 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 SENP1Q9P0U3 644 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 UBA2Q9UBT2 640 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 GNPTGQ9UJJ9 305 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TLK1Q9UKI8 766 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 AGO2Q9UKV8 859 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 PHTF1Q9UMS5 762 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 EDARQ9UNE0 448 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 SNX24Q9Y343 169 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 JMJD1CQ15652 2540 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CFAP47Q6ZTR5 3102 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TCF20Q9UGU0 1960 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 AFDNP55196 1824 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 SH3D21A4FU49 640 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 NEURL1BA8MQ27 555 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 FADS2P1A8MWK0 482 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 EVPLLA8MZ36 301 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 FAM25AB3EWG3 89 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 FAM25CB3EWG5 89 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 FAM25GB3EWG6 89 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 POC1B-GALNT4F8VUJ3 575 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms