RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 LHX1P48742 406 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 ZNF131P52739 623 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 SLC7A9P82251 487 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 GTF2BQ00403 316 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 MYL7Q01449 175 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 RPL6Q02878 288 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 ORC1Q13415 861 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 DHCR24Q15392 516 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 GAB4Q2WGN9 574 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 ZC2HC1CQ53FD0 456 aaPredicted RBP8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 EXOSC6Q5RKV6 272 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 SDHAF4Q5VUM1 108 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 SPATA2LQ8IUW3 424 aaPredicted RBP8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 PDCL2Q8N4E4 241 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 LRRC15Q8TF66 581 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 HMGB4Q8WW32 186 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 CDK5RAP3Q96JB5 506 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 SPATA17Q96L03 361 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 LLPHQ9BRT6 129 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 CLEC4MQ9H2X3 399 aaPredicted RBP8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 FAM124BQ9H5Z6 455 aaPredicted RBP8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 PARVGQ9HBI0 331 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 DDX43Q9NXZ2 648 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 EHD2Q9NZN4 543 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 TRPM5Q9NZQ8 1165 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 KIAA1522Q9P206 1035 aaPredicted RBP8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 SUSD2Q9UGT4 822 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 APOBEC2Q9Y235 224 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 STYXL1Q9Y6J8 313 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 PLXNB3Q9ULL4 1909 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 PCDH15Q96QU1 1955 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 HELZP42694 1942 aaKnown RBP8.96□□□□□ -0.97
NIF3L1-208ENST00000436412 TCRBV21S2A2A0A5A6 115 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 K7ENM7 598 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 GJB3O75712 270 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 ACOT2P49753 483 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 TOB1P50616 345 aaPredicted RBP8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 HMGN5P82970 282 aaKnown RBP8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 ZNF33AQ06730 810 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 RESTQ13127 1097 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 POSTNQ15063 836 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 ZRSR1Q15695 479 aaKnown RBP8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 IL17AQ16552 155 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 ARSHQ5FYA8 562 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 ADALQ6DHV7 355 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 VSTM1Q6UX27 236 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 C4orf50Q6ZRC1 276 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 FILIP1Q7Z7B0 1213 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 GLRX5Q86SX6 157 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 DDX42Q86XP3 938 aaKnown RBP eCLIP8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 SHISA5Q8N114 240 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 MYCT1Q8N699 235 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 FRMD1Q8N878 549 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 C2CD4AQ8NCU7 369 aaPredicted RBP8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 STKLD1Q8NE28 680 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 PKMYT1Q99640 499 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 ZDHHC5Q9C0B5 715 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 CYP4F12Q9HCS2 524 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 ARHGEF4Q9NR80 690 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 TBC1D14Q9P2M4 693 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 GTF3C4Q9UKN8 822 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 AGO2Q9UKV8 859 aaKnown RBP8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 L1RE1Q9UN81 338 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 PCDHB6Q9Y5E3 794 aa8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 ATXN2Q99700 1313 aaKnown RBP8.96□□□□□ -0.98
NIF3L1-208ENST00000436412 PIEZO2Q9H5I5 2752 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 GABRDO14764 452 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 SH3BP5O60239 455 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 GNSP15586 552 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 NEK4P51957 841 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 ATP2C1P98194 919 aaPredicted RBP8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 MAPRE1Q15691 268 aaKnown RBP8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 TMEM119Q4V9L6 283 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 SYCP2LQ5T4T6 812 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 CDPF1Q6NVV7 123 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 SLC39A4Q6P5W5 647 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 FAM171BQ6P995 826 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 RHBDF2Q6PJF5 856 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 DENND5BQ6ZUT9 1274 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 DTX1Q86Y01 620 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 SCN4BQ8IWT1 228 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 TOP6BLQ8N6T0 577 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 LRRC52Q8N7C0 313 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 CACTINQ8WUQ7 758 aaKnown RBP8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 OTUB2Q96DC9 234 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 ZNF419Q96HQ0 510 aaPredicted RBP8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 REEP2Q9BRK0 252 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 TRIM56Q9BRZ2 755 aaKnown RBP8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 TTLL2Q9BWV7 592 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 ST6GALNAC4Q9H4F1 302 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 GDAP2Q9NXN4 497 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 SHROOM3Q8TF72 1996 aa8.95□□□□□ -0.98
NIF3L1-208ENST00000436412 PTPRBP23467 1997 aa8.94□□□□□ -0.98
NIF3L1-208ENST00000436412 NPHP3-ACAD11A0A0J9YXS1 232 aa8.94□□□□□ -0.98
NIF3L1-208ENST00000436412 TBC1D3BA6NDS4 549 aa8.94□□□□□ -0.98
NIF3L1-208ENST00000436412 ZNF840PA6NDX5 716 aa8.94□□□□□ -0.98
NIF3L1-208ENST00000436412 ANTXRLA6NF34 631 aa8.94□□□□□ -0.98
NIF3L1-208ENST00000436412 ANKRD63C9JTQ0 380 aa8.94□□□□□ -0.98
NIF3L1-208ENST00000436412 OLFM2O95897 454 aa8.94□□□□□ -0.98
NIF3L1-208ENST00000436412 ZNF883P0CG24 379 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms