RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 RCN1Q15293 331 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 MUM1Q2TAK8 710 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 NCBP2-AS2Q69YL0 99 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 ANO7Q6IWH7 933 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 DPH6Q7L8W6 267 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 SULF1Q8IWU6 871 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 PPFIBP2Q8ND30 876 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 NLRP7Q8WX94 980 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 ISL2Q96A47 359 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 FAM136AQ96C01 138 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 KCTD15Q96SI1 283 aaPredicted RBP14.09□□□□□ -0.15
COL6A3-207ENST00000433762 C16orf70Q9BSU1 422 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 NMRK1Q9NWW6 199 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 GDAP2Q9NXN4 497 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 DTLQ9NZJ0 730 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 ADAM28Q9UKQ2 775 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 PLA2G4CQ9UP65 541 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 CIB2O75838 187 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 GABBR2O75899 941 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 DDNO94850 711 aaPredicted RBP14.09□□□□□ -0.15
COL6A3-207ENST00000433762 KLHL2O95198 593 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 IGBP1P78318 339 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 GBE1Q04446 702 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 MTM1Q13496 603 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 KPNB1Q14974 876 aaKnown RBP14.09□□□□□ -0.15
COL6A3-207ENST00000433762 Q3C1V9 767 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 HSF5Q4G112 596 aaPredicted RBP14.09□□□□□ -0.15
COL6A3-207ENST00000433762 PPP6R3Q5H9R7 873 aaPredicted RBP14.09□□□□□ -0.15
COL6A3-207ENST00000433762 SNX30Q5VWJ9 437 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 SLC27A1Q6PCB7 646 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 ALKAL1Q6UXT8 129 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 LRRC74BQ6ZQY2 392 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 BNIPLQ7Z465 357 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 ADGRG6Q86SQ4 1221 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 SCUBE3Q8IX30 993 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 OTUD5Q96G74 571 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 ZNF560Q96MR9 790 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 OSBPL1AQ9BXW6 950 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 DHX35Q9H5Z1 703 aaKnown RBP14.09□□□□□ -0.15
COL6A3-207ENST00000433762 PDGFCQ9NRA1 345 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 PCMTD2Q9NV79 361 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.09□□□□□ -0.15
COL6A3-207ENST00000433762 UBQLN1Q9UMX0 589 aaKnown RBP14.09□□□□□ -0.15
COL6A3-207ENST00000433762 SNX9Q9Y5X1 595 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 MAD1L1Q9Y6D9 718 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 RRN3P2A6NIE6 340 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 B2RBV5 119 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 XPOTO43592 962 aaKnown RBP14.08□□□□□ -0.16
COL6A3-207ENST00000433762 VTNP04004 478 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 AXLP30530 894 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 MATKP42679 507 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 GCLCP48506 637 aaPredicted RBP14.08□□□□□ -0.16
COL6A3-207ENST00000433762 GSTA3Q16772 222 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 ZNF792Q3KQV3 632 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 FAXCQ5TGI0 409 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 TRMT10BQ6PF06 316 aaKnown RBP14.08□□□□□ -0.16
COL6A3-207ENST00000433762 MAMDC4Q6UXC1 1216 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 TTC7BQ86TV6 843 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 ADGRF2Q8IZF7 708 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 PDCD7Q8N8D1 485 aaKnown RBP14.08□□□□□ -0.16
COL6A3-207ENST00000433762 PIWIL2Q8TC59 973 aaKnown RBP14.08□□□□□ -0.16
COL6A3-207ENST00000433762 STON2Q8WXE9 905 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 ELP3Q9H9T3 547 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 PPARGC1AQ9UBK2 798 aaKnown RBP14.08□□□□□ -0.16
COL6A3-207ENST00000433762 FZD10Q9ULW2 581 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 SRCAPQ6ZRS2 3230 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 TSC2P49815 1807 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 DAB1O75553 588 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 NPTXRO95502 500 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 SERPINE1P05121 402 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 CCDC130P13994 396 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 CDK7P50613 346 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 PDK1Q15118 436 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 SLC25A52Q3SY17 297 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 MBLAC2Q68D91 279 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 AAGABQ6PD74 315 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 PACS1Q6VY07 963 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 ALYREFQ86V81 257 aaKnown RBP14.08□□□□□ -0.16
COL6A3-207ENST00000433762 SCUBE1Q8IWY4 988 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 PRR11Q96HE9 360 aaPredicted RBP14.08□□□□□ -0.16
COL6A3-207ENST00000433762 SLC13A1Q9BZW2 595 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 VCXQ9H320 206 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 R3HDMLQ9H3Y0 253 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 DNAJC28Q9NX36 388 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 IGSF9Q9P2J2 1179 aa14.08□□□□□ -0.16
COL6A3-207ENST00000433762 H0Y3Z8 333 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 H3BRJ5 948 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 CAPN9O14815 690 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 PLIN3O60664 434 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 FKBP6O75344 327 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 GSRP00390 522 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 AQP5P55064 265 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 ACTR3P61158 418 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 CCNA1P78396 465 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 BMPR2Q13873 1038 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 SPANXN3Q5MJ09 141 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 TREML1Q86YW5 311 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 MICAL1Q8TDZ2 1067 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 NT5C3BQ969T7 300 aa14.07□□□□□ -0.16
COL6A3-207ENST00000433762 CCDC28BQ9BUN5 200 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms