RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 PCDHB2Q9Y5E7 798 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 CORINQ9Y5Q5 1042 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 CPQQ9Y646 472 aa16.55■□□□□ 0.24
C9orf3-206ENST00000428313 MYH9P35579 1960 aaKnown RBP16.55■□□□□ 0.24
C9orf3-206ENST00000428313 TMX2-CTNND1H3BSU7 103 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 TRDMT1O14717 391 aaKnown RBP16.54■□□□□ 0.24
C9orf3-206ENST00000428313 LYPLA1O75608 230 aaPredicted RBP16.54■□□□□ 0.24
C9orf3-206ENST00000428313 RNASEH2AO75792 299 aaKnown RBP16.54■□□□□ 0.24
C9orf3-206ENST00000428313 ZMPSTE24O75844 475 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 FGF3P11487 239 aaPredicted RBP16.54■□□□□ 0.24
C9orf3-206ENST00000428313 PTPN1P18031 435 aaKnown RBP16.54■□□□□ 0.24
C9orf3-206ENST00000428313 CD247P20963 164 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 NLRP11P59045 1033 aaKnown RBP16.54■□□□□ 0.24
C9orf3-206ENST00000428313 ITGADQ13349 1161 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 NRF1Q16656 503 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 FGD3Q5JSP0 725 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 VASH1Q7L8A9 365 aaPredicted RBP16.54■□□□□ 0.24
C9orf3-206ENST00000428313 CPNE9Q8IYJ1 553 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 PPM1NQ8N819 430 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 ATP6V0D2Q8N8Y2 350 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 HSD17B14Q9BPX1 270 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 IMPG2Q9BZV3 1241 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 PCIF1Q9H4Z3 704 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 LOXHD1Q8IVV2 1947 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 TLR3O15455 904 aaKnown RBP16.54■□□□□ 0.24
C9orf3-206ENST00000428313 DCXO43602 365 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 GCATO75600 419 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 ERBB2P04626 1255 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 SERPINE1P05121 402 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 ME2P23368 584 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 PRKCHP24723 683 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 GRSF1Q12849 480 aaKnown RBP eCLIP16.54■□□□□ 0.24
C9orf3-206ENST00000428313 ATP13A4Q4VNC1 1196 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 ZFYVE27Q5T4F4 411 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 PPP1R2P3Q6NXS1 205 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 HAUS6Q7Z4H7 955 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 MAPKAPK5Q8IW41 473 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 CADM3Q8N126 398 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 NDUFAF2Q8N183 169 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 DDX56Q9NY93 547 aaKnown RBP16.54■□□□□ 0.24
C9orf3-206ENST00000428313 MTMR4Q9NYA4 1195 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 DAPK2Q9UIK4 370 aa16.54■□□□□ 0.24
C9orf3-206ENST00000428313 PARNO95453 639 aaKnown RBP16.53■□□□□ 0.24
C9orf3-206ENST00000428313 PROZP22891 400 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 GRK2P25098 689 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 CDKN2BP42772 138 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 NUMBP49757 651 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 NUDT2P50583 147 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 GDF10P55107 478 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 DMPKQ09013 629 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 ABCB5Q2M3G0 1257 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 FAM209AQ5JX71 171 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 TRIM72Q6ZMU5 477 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 IGFN1Q86VF2 1251 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 MMAAQ8IVH4 418 aaKnown RBP16.53■□□□□ 0.24
C9orf3-206ENST00000428313 CTAGE3PQ8IX95 158 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 DSELQ8IZU8 1212 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 HPS1Q92902 700 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 ACDQ96AP0 544 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 ALPK1Q96QP1 1244 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 CDRT15Q96T59 188 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 SH3GL1Q99961 368 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 QPCTLQ9NXS2 382 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 RBMX2Q9Y388 322 aaKnown RBP16.53■□□□□ 0.24
C9orf3-206ENST00000428313 MSH4O15457 936 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 DYNC1LI2O43237 492 aaPredicted RBP16.53■□□□□ 0.24
C9orf3-206ENST00000428313 NOL3O60936 208 aaKnown RBP16.53■□□□□ 0.24
C9orf3-206ENST00000428313 GSRP00390 522 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 KRT5P13647 590 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 NELFEP18615 380 aaKnown RBP16.53■□□□□ 0.24
C9orf3-206ENST00000428313 SNRPFP62306 86 aaKnown RBP16.53■□□□□ 0.24
C9orf3-206ENST00000428313 MS4A2Q01362 244 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 INTS5Q6P9B9 1019 aaKnown RBP16.53■□□□□ 0.24
C9orf3-206ENST00000428313 PGAM4Q8N0Y7 254 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 FEZF2Q8TBJ5 459 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 RSAD2Q8WXG1 361 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 DHX38Q92620 1227 aaKnown RBP16.53■□□□□ 0.24
C9orf3-206ENST00000428313 WNK4Q96J92 1243 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 KLHL32Q96NJ5 620 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 MMP19Q99542 508 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 HOMER2Q9NSB8 354 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 HSPBP1Q9NZL4 362 aa16.53■□□□□ 0.24
C9orf3-206ENST00000428313 HTRA2O43464 458 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-206ENST00000428313 ZBTB14O43829 449 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 CAPN15O75808 1086 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 TCEA1P23193 301 aaKnown RBP16.52■□□□□ 0.24
C9orf3-206ENST00000428313 KLRK1P26718 216 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 GCNT1Q02742 428 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 E2F2Q14209 437 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 CEP55Q53EZ4 464 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 GPATCH4Q5T3I0 446 aaKnown RBP16.52■□□□□ 0.24
C9orf3-206ENST00000428313 FAXCQ5TGI0 409 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 MAMDC4Q6UXC1 1216 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 TIFABQ6ZNK6 161 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 COLGALT2Q8IYK4 626 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 SIX6OS1Q8N1H7 587 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 ANKK1Q8NFD2 765 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 CNDP1Q96KN2 507 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 SORT1Q99523 831 aa16.52■□□□□ 0.24
C9orf3-206ENST00000428313 KLHL25Q9H0H3 589 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms