RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 ARL13BQ3SXY8 428 aa17.97■□□□□ 0.47
FN1-208ENST00000426059 RFX8Q6ZV50 586 aa17.97■□□□□ 0.47
FN1-208ENST00000426059 PSTKQ8IV42 348 aaKnown RBP17.97■□□□□ 0.47
FN1-208ENST00000426059 C7orf61Q8IZ16 206 aa17.97■□□□□ 0.47
FN1-208ENST00000426059 VPS52Q8N1B4 723 aa17.97■□□□□ 0.47
FN1-208ENST00000426059 NTAN1Q96AB6 310 aa17.97■□□□□ 0.47
FN1-208ENST00000426059 FRMD8P1Q9BZ68 369 aaPredicted RBP17.97■□□□□ 0.47
FN1-208ENST00000426059 PCDH9Q9HC56 1237 aa17.97■□□□□ 0.47
FN1-208ENST00000426059 SPG21Q9NZD8 308 aa17.97■□□□□ 0.47
FN1-208ENST00000426059 OR12D3Q9UGF7 316 aa17.97■□□□□ 0.47
FN1-208ENST00000426059 NUP205Q92621 2012 aa17.97■□□□□ 0.47
FN1-208ENST00000426059 CHD7Q9P2D1 2997 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 MOCS2O96007 188 aaPredicted RBP17.96■□□□□ 0.47
FN1-208ENST00000426059 GBP1P32455 592 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 GLUD2P49448 558 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 EIF4EBP2Q13542 120 aaPredicted RBP17.96■□□□□ 0.47
FN1-208ENST00000426059 UHMK1Q8TAS1 419 aaKnown RBP17.96■□□□□ 0.47
FN1-208ENST00000426059 ACBD3Q9H3P7 528 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 USP29Q9HBJ7 922 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 LRRC4CQ9HCJ2 640 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 ZNF487B1APH4 448 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 H3BRJ5 948 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 GOLGA8MH3BSY2 632 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 DNALI1O14645 258 aaPredicted RBP17.96■□□□□ 0.47
FN1-208ENST00000426059 EFCAB14O75071 495 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 BAIAP3O94812 1187 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 SRGAP2BP0DMP2 458 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 LAG3P18627 525 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 CA8P35219 290 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 PMS2P54278 862 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 DSG1Q02413 1049 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 GAD2Q05329 585 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 SCAPQ12770 1279 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 MTM1Q13496 603 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 SMOC2Q9H3U7 446 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 IL37Q9NZH6 218 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 BACE2Q9Y5Z0 518 aa17.96■□□□□ 0.47
FN1-208ENST00000426059 ERCC2P18074 760 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 GYS2P54840 703 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 TPI1P60174 286 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 FPGSQ05932 587 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 EFEMP1Q12805 493 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 SEMA3BQ13214 749 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 DPYSQ14117 519 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 HIBCHQ6NVY1 386 aaPredicted RBP17.95■□□□□ 0.46
FN1-208ENST00000426059 LGMNQ99538 433 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 ZBED2Q9BTP6 218 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 EPB41L4BQ9H329 900 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 SLC38A8A6NNN8 435 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 GJB5O95377 273 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 RARGP13631 454 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 HP1BP3Q5SSJ5 553 aaPredicted RBP17.95■□□□□ 0.46
FN1-208ENST00000426059 ANKRD22Q5VYY1 191 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 BEND5Q7L4P6 421 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 MIB1Q86YT6 1006 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 TRIM62Q9BVG3 475 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 CYP4F11Q9HBI6 524 aa17.95■□□□□ 0.46
FN1-208ENST00000426059 TPX2Q9ULW0 747 aaKnown RBP17.95■□□□□ 0.46
FN1-208ENST00000426059 LRIG2O94898 1065 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 SPATA31D3P0C874 917 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 SMARCB1Q12824 385 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 GPS2Q13227 327 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 ALS2CLQ60I27 953 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 SPATA31D4Q6ZUB0 917 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 ZNF461Q8TAF7 563 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 SPATA17Q96L03 361 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 RUFY1Q96T51 708 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 CCSER2Q9H7U1 834 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 RCOR3Q9P2K3 495 aaPredicted RBP17.94■□□□□ 0.46
FN1-208ENST00000426059 PRDM4Q9UKN5 801 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 TCRBV7S3A2A0A539 114 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 FAM92AA1XBS5 289 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 PAGE1O75459 146 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 RTN3O95197 1032 aaPredicted RBP17.94■□□□□ 0.46
FN1-208ENST00000426059 HMBSP08397 361 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 ZFXP17010 805 aaPredicted RBP17.94■□□□□ 0.46
FN1-208ENST00000426059 AIF1P55008 147 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 RPL10AP62906 217 aaKnown RBP17.94■□□□□ 0.46
FN1-208ENST00000426059 PPIGQ13427 754 aaKnown RBP eCLIP17.94■□□□□ 0.46
FN1-208ENST00000426059 HSP90B2PQ58FF3 399 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 TMEM240Q5SV17 173 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 RNASEH2BQ5TBB1 312 aaKnown RBP17.94■□□□□ 0.46
FN1-208ENST00000426059 DDX53Q86TM3 631 aaKnown RBP17.94■□□□□ 0.46
FN1-208ENST00000426059 CCDC110Q8TBZ0 833 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 CCHCR1Q8TD31 782 aa17.94■□□□□ 0.46
FN1-208ENST00000426059 C2orf15Q8WU43 125 aaKnown RBP17.94■□□□□ 0.46
FN1-208ENST00000426059 OXCT2Q9BYC2 517 aaPredicted RBP17.94■□□□□ 0.46
FN1-208ENST00000426059 MYO18AQ92614 2054 aaKnown RBP17.93■□□□□ 0.46
FN1-208ENST00000426059 H0YGN5 161 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 DCLK1O15075 740 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 SHBGP04278 402 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 URODP06132 367 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 EPHB2P29323 1055 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 STIP1P31948 543 aaKnown RBP17.93■□□□□ 0.46
FN1-208ENST00000426059 CCR1P32246 355 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 BASP1P80723 227 aaKnown RBP17.93■□□□□ 0.46
FN1-208ENST00000426059 FAXCQ5TGI0 409 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 NPWQ8N729 165 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 CPT1BQ92523 772 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms