RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 VCPIP1Q96JH7 1222 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 FAM84AQ96KN4 292 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 TNIP3Q96KP6 325 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 AK8Q96MA6 479 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLC6A18Q96N87 628 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 DEPDC7Q96QD5 511 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ACCSQ96QU6 501 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 KCNK16Q96T55 309 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 MRPL45Q9BRJ2 306 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ARHGAP9Q9BRR9 750 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 LLPHQ9BRT6 129 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 MED10Q9BTT4 135 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 B3GNT5Q9BYG0 378 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLC2A11Q9BYW1 496 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 TRIM4Q9C037 500 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 DCLK3Q9C098 648 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 MTMR12Q9C0I1 747 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ABCG4Q9H172 646 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 TMEM245Q9H330 911 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 DPEP3Q9H4B8 488 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 MRPL44Q9H9J2 332 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ERVMER34-1Q9H9K5 563 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 POLR1BQ9H9Y6 1135 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 KIAA1586Q9HCI6 787 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 CYLDQ9NQC7 956 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 TMEM30AQ9NV96 361 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 EVA1BQ9NVM1 165 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 INTS13Q9NVM9 706 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 FBXL12Q9NXK8 326 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 IL37Q9NZH6 218 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ANKMY1Q9P2S6 941 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SEL1LQ9UBV2 794 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SUN2Q9UH99 717 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 TPX2Q9ULW0 747 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SCML1Q9UN30 329 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 PLA2G4CQ9UP65 541 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 PCDHB13Q9Y5F0 798 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 KIF26AQ9ULI4 1882 aaPredicted RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 COL12A1Q99715 3063 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ARID2Q68CP9 1835 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 PTPRBP23467 1997 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 MTORP42345 2549 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PLXND1Q9Y4D7 1925 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 WDFY3Q8IZQ1 3526 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 NAV3Q8IVL0 2385 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 A0A1W2PQH9 124 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 A0A1W2PR77 199 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ENO4A6NNW6 628 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 TLR4O00206 839 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 MDM4O15151 490 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 SUV39H1O43463 412 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 SIGLEC6O43699 453 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 OPA1O60313 960 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 RNASEH1O60930 286 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PHACTR2O75167 634 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CSO75390 466 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 RNASEH2AO75792 299 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 AP1G2O75843 785 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PPP1R37O75864 691 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 STC2O76061 302 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 GCNT3O95395 438 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 GJB6O95452 261 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 STAU1O95793 577 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CST3P01034 146 aaPredicted RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 KLKB1P03952 638 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ITGB2P05107 769 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 IGHV4-34P06331 123 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ATP5BP06576 529 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 GP1BAP07359 652 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 DLDP09622 509 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 DLATP10515 647 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 RALAP11233 206 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CKMT1AP12532 417 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 RARGP13631 454 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 KRT10P13645 584 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 GAP43P17677 238 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 TNNI1P19237 187 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CORO1AP31146 461 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ATICP31939 592 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 NUDT1P36639 197 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 MLLT3P42568 568 aaPredicted RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 AFMP43652 599 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PGFP49763 221 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PSEN1P49768 467 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 DUSP3P51452 185 aaPredicted RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CCR5P51681 352 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 GALCP54803 685 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZNF445P59923 1031 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ST8SIA6P61647 398 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 SKOR1P84550 965 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 TLE1Q04724 770 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PDE4CQ08493 712 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 KCNA1Q09470 495 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 OVGP1Q12889 678 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 BNIP3Q12983 259 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 TRPC3Q13507 836 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ALCAMQ13740 583 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 UBAP2LQ14157 1087 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 KCNJ12Q14500 433 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms