RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 TMCO3Q6UWJ1 677 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 RRAGAQ7L523 313 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 SYT13Q7L8C5 426 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 KBTBD6Q86V97 674 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 MIB1Q86YT6 1006 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 ARHGEF19Q8IW93 802 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 ETFBKMTQ8IXQ9 262 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 C17orf53Q8N3J3 647 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 FAM160A2Q8N612 972 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 ALLCQ8N6M5 410 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 LMO3Q8TAP4 145 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 UBA3Q8TBC4 463 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 TFAP2BQ92481 460 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 ERLEC1Q96DZ1 483 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 PNPLA8Q9NP80 782 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 HOOK1Q9UJC3 728 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 TSPAN16Q9UKR8 245 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 INVSQ9Y283 1065 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 MYH10P35580 1976 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 F8VZ95 297 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 PIK3R2O00459 728 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 SLC9A3R1O14745 358 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 ATG13O75143 517 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 TULP3O75386 442 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 KAT7O95251 611 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 ADH1CP00326 375 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 KLKB1P03952 638 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 HMBSP08397 361 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 ZNF24P17028 368 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 HOXA6P31267 233 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 ATP5C1P36542 298 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 STIM1Q13586 685 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 ANO4Q32M45 955 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 FBXO43Q4G163 708 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 RAB41Q5JT25 222 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 C10orf120Q5SQS8 335 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 LAIR1Q6GTX8 287 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 TOGARAM2Q6ZUX3 1019 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 DDX42Q86XP3 938 aaKnown RBP eCLIP10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 MFN1Q8IWA4 741 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 PHC3Q8NDX5 983 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 CEP63Q96MT8 703 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 PNKPQ96T60 521 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 TPSD1Q9BZJ3 242 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 SMOC1Q9H4F8 434 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 ARHGEF4Q9NR80 690 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 SPHK2Q9NRA0 654 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 USP18Q9UMW8 372 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 EML5Q05BV3 1969 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 NEDD8-MDP1E9PL57 170 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 SGK1O00141 431 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 O00370 1275 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 POLR3GO15318 223 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 OPA1O60313 960 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 GDF9O60383 454 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 ADAM23O75077 832 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 RPP40O75818 363 aaKnown RBP10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 CCDC175P0C221 793 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 CD19P15391 556 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 OAS2P29728 719 aaKnown RBP10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 KIR2DL1P43626 348 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 TKTL1P51854 596 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 APBA1Q02410 837 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 EFEMP1Q12805 493 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 PAK1Q13153 545 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 RSPO4Q2I0M5 234 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 ANO7Q6IWH7 933 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 TMEM270Q6UE05 265 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 TPGS1Q6ZTW0 290 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 HTR3DQ70Z44 454 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 CCDC80Q76M96 950 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 CEP68Q76N32 757 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 TRIM59Q8IWR1 403 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 IL17RCQ8NAC3 791 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 ANKRD52Q8NB46 1076 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 TXNDC5Q8NBS9 432 aaKnown RBP10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 GAB3Q8WWW8 586 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 MRFAP1L1Q96HT8 127 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 DCBLD2Q96PD2 775 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 ULBP1Q9BZM6 244 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 PLK2Q9NYY3 685 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 TBC1D14Q9P2M4 693 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 GMEB2Q9UKD1 530 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 PYCARDQ9ULZ3 195 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 CELSR3Q9NYQ7 3312 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 CFAP47Q6ZTR5 3102 aa10.11□□□□□ -0.79
NIF3L1-202ENST00000409020 SYCE3A1L190 88 aa10.1□□□□□ -0.79
NIF3L1-202ENST00000409020 EME2A4GXA9 379 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-202ENST00000409020 AXIN1O15169 862 aa10.1□□□□□ -0.79
NIF3L1-202ENST00000409020 HOXC11O43248 304 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-202ENST00000409020 AHCYL1O43865 530 aa10.1□□□□□ -0.79
NIF3L1-202ENST00000409020 E2F6O75461 281 aa10.1□□□□□ -0.79
NIF3L1-202ENST00000409020 STC2O76061 302 aa10.1□□□□□ -0.79
NIF3L1-202ENST00000409020 KLF8O95600 359 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-202ENST00000409020 APBB3O95704 486 aa10.1□□□□□ -0.79
NIF3L1-202ENST00000409020 TUBB4AP04350 444 aa10.1□□□□□ -0.79
NIF3L1-202ENST00000409020 RETP07949 1114 aa10.1□□□□□ -0.79
NIF3L1-202ENST00000409020 CCDC192P0DO97 292 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms