RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 NUP205Q92621 2012 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 TCRBV7S3A2A0A539 114 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 RIPK2O43353 540 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 TRAPPC3O43617 180 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 C4orf50Q6ZRC1 276 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 TAC4Q86UU9 113 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 RANBP2P49792 3224 aaKnown RBP15.67■□□□□ 0.1
COL25A1-201ENST00000399126 ARHGEF37A1IGU5 675 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 SMIM23A6NLE4 172 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 BANF1O75531 89 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 RBL1P28749 1068 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 C4orf46Q504U0 113 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 RNASEH2BQ5TBB1 312 aaKnown RBP15.67■□□□□ 0.1
COL25A1-201ENST00000399126 NCBP2-AS2Q69YL0 99 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 FUT10Q6P4F1 479 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 LRIG3Q6UXM1 1119 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 TP53INP2Q8IXH6 220 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 CRISPLD1Q9H336 500 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 USP29Q9HBJ7 922 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL25A1-201ENST00000399126 HNRNPH1P31943 449 aaKnown RBP15.67■□□□□ 0.1
COL25A1-201ENST00000399126 CTCFP49711 727 aaPredicted RBP15.67■□□□□ 0.1
COL25A1-201ENST00000399126 FASTKD3Q14CZ7 662 aaKnown RBP15.67■□□□□ 0.1
COL25A1-201ENST00000399126 KYNUQ16719 465 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 DENND2CQ68D51 928 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 FAM117BQ6P1L5 589 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 PAWRQ96IZ0 340 aaKnown RBP15.67■□□□□ 0.1
COL25A1-201ENST00000399126 C9orf72Q96LT7 481 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 TOX2Q96NM4 488 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 NMUR1Q9HB89 426 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 ARHGEF4Q9NR80 690 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 TMEM39AQ9NV64 488 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 IRAK4Q9NWZ3 460 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 SLC27A5Q9Y2P5 690 aa15.67■□□□□ 0.1
COL25A1-201ENST00000399126 COL4A4P53420 1690 aaPredicted RBP15.66■□□□□ 0.1
COL25A1-201ENST00000399126 COL4A6Q14031 1691 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 GOLGA8KD6RF30 607 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 SYN3O14994 580 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 TGM2P21980 687 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 USP46P62068 366 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 MRPL58Q14197 206 aaKnown RBP15.66■□□□□ 0.1
COL25A1-201ENST00000399126 SLMAPQ14BN4 828 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 LRRC26Q2I0M4 334 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 PRSS55Q6UWB4 352 aaPredicted RBP15.66■□□□□ 0.1
COL25A1-201ENST00000399126 DQX1Q8TE96 717 aaKnown RBP15.66■□□□□ 0.1
COL25A1-201ENST00000399126 RNF139Q8WU17 664 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 CPT1BQ92523 772 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 FRMD8P1Q9BZ68 369 aaPredicted RBP15.66■□□□□ 0.1
COL25A1-201ENST00000399126 TMBIM4Q9HC24 238 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 OSER1Q9NX31 292 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 MRPL42Q9Y6G3 142 aaKnown RBP15.66■□□□□ 0.1
COL25A1-201ENST00000399126 CHD7Q9P2D1 2997 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 KCNN4O15554 427 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 FGFR3P22607 806 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 ADRA1BP35368 520 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 IFFO1Q0D2I5 559 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 KRT71Q3SY84 523 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 SCD5Q86SK9 330 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 PRCCQ92733 491 aaPredicted RBP15.66■□□□□ 0.1
COL25A1-201ENST00000399126 RBM15Q96T37 977 aaKnown RBP eCLIP15.66■□□□□ 0.1
COL25A1-201ENST00000399126 COLEC11Q9BWP8 271 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 FAM129AQ9BZQ8 928 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 DTLQ9NZJ0 730 aa15.66■□□□□ 0.1
COL25A1-201ENST00000399126 FARP1Q9Y4F1 1045 aaPredicted RBP15.66■□□□□ 0.1
COL25A1-201ENST00000399126 SF3B1O75533 1304 aaKnown RBP eCLIP15.65■□□□□ 0.1
COL25A1-201ENST00000399126 MSI1O43347 362 aaKnown RBP15.65■□□□□ 0.1
COL25A1-201ENST00000399126 MFSD11O43934 449 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 VNN2O95498 520 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 NUDT17P0C025 328 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 SLCO1A2P46721 670 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 E2F5Q15329 346 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 FAXCQ5TGI0 409 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 FOXR1Q6PIV2 292 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 DCP1BQ8IZD4 617 aaKnown RBP15.65■□□□□ 0.1
COL25A1-201ENST00000399126 ZCCHC9Q8N567 271 aaKnown RBP15.65■□□□□ 0.1
COL25A1-201ENST00000399126 CCHCR1Q8TD31 782 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 EPS8L3Q8TE67 593 aaKnown RBP15.65■□□□□ 0.1
COL25A1-201ENST00000399126 SH3GL3Q99963 347 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 PNPLA8Q9NP80 782 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 NINJ2Q9NZG7 142 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 SFMBT1Q9UHJ3 866 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 TMEM63AO94886 807 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 MYZAPP0CAP1 466 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 RPL17P18621 184 aaKnown RBP15.65■□□□□ 0.1
COL25A1-201ENST00000399126 ARL4AP40617 200 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 YWHAGP61981 247 aaKnown RBP eCLIP15.65■□□□□ 0.1
COL25A1-201ENST00000399126 CAV1Q03135 178 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 EFHC2Q5JST6 749 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 VSIG1Q86XK7 387 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 VN1R3Q9BXE9 311 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 FBXW11Q9UKB1 542 aa15.65■□□□□ 0.1
COL25A1-201ENST00000399126 ADAM12O43184 909 aa15.64■□□□□ 0.09
COL25A1-201ENST00000399126 CPB1P15086 417 aa15.64■□□□□ 0.09
COL25A1-201ENST00000399126 BASP1P80723 227 aaKnown RBP15.64■□□□□ 0.09
COL25A1-201ENST00000399126 KCNT2Q6UVM3 1135 aa15.64■□□□□ 0.09
COL25A1-201ENST00000399126 RNF19BQ6ZMZ0 732 aa15.64■□□□□ 0.09
COL25A1-201ENST00000399126 BBOF1Q8ND07 529 aa15.64■□□□□ 0.09
COL25A1-201ENST00000399126 IRGQQ8WZA9 623 aa15.64■□□□□ 0.09
COL25A1-201ENST00000399126 ATP6V1G3Q96LB4 118 aa15.64■□□□□ 0.09
COL25A1-201ENST00000399126 TKTL2Q9H0I9 626 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms