RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TK1P04183 234 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 PRKCBP05771 671 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 EBLN1P0CF75 366 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 SRGAP2BP0DMP2 458 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 ZFXP17010 805 aaPredicted RBP3.16□□□□□ -1.9
CD47-203ENST00000398258 GPD1P21695 349 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 KLRK1P26718 216 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 LIPAP38571 399 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 CSHL1Q14406 222 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 SMAD1Q15797 465 aaKnown RBP3.16□□□□□ -1.9
CD47-203ENST00000398258 FAM110CQ1W6H9 321 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 TSTD2Q5T7W7 516 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 ATPAF1Q5TC12 328 aaPredicted RBP3.16□□□□□ -1.9
CD47-203ENST00000398258 CCDC70Q6NSX1 233 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 CLEC9AQ6UXN8 241 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 MMS22LQ6ZRQ5 1243 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 PIK3AP1Q6ZUJ8 805 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 CAND1Q86VP6 1230 aaKnown RBP3.16□□□□□ -1.9
CD47-203ENST00000398258 OR4N4Q8N0Y3 316 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 LRRC71Q8N4P6 559 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 OR6Y1Q8NGX8 325 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 RP9Q8TA86 221 aaKnown RBP3.16□□□□□ -1.9
CD47-203ENST00000398258 USP13Q92995 863 aaPredicted RBP3.16□□□□□ -1.9
CD47-203ENST00000398258 PBKQ96KB5 322 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 ZSCAN31Q96LW9 406 aaPredicted RBP3.16□□□□□ -1.9
CD47-203ENST00000398258 FAM167BQ9BTA0 163 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 SPRTNQ9H040 489 aaPredicted RBP3.16□□□□□ -1.9
CD47-203ENST00000398258 VPS16Q9H269 839 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 GLOD4Q9HC38 313 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 SERTAD4Q9NUC0 356 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 GAR1Q9NY12 217 aaKnown RBP3.16□□□□□ -1.9
CD47-203ENST00000398258 EHD3Q9NZN3 535 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 NKX1-2Q9UD57 310 aaPredicted RBP3.16□□□□□ -1.9
CD47-203ENST00000398258 CNTN6Q9UQ52 1028 aa3.16□□□□□ -1.9
CD47-203ENST00000398258 CCDC151A5D8V7 595 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 EFCAB8A8MWE9 144 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 H0Y3Z8 333 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 EIF3FO00303 357 aaPredicted RBP3.15□□□□□ -1.91
CD47-203ENST00000398258 ORC4O43929 436 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 PMPCBO75439 489 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 RPP40O75818 363 aaKnown RBP3.15□□□□□ -1.91
CD47-203ENST00000398258 USP1O94782 785 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 LARGE1O95461 756 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 VNN1O95497 513 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 TTLL1O95922 423 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 TFRCP02786 760 aaKnown RBP3.15□□□□□ -1.91
CD47-203ENST00000398258 FESP07332 822 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 CKMT1AP12532 417 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 GYS1P13807 737 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 SFPQP23246 707 aaKnown RBP eCLIP3.15□□□□□ -1.91
CD47-203ENST00000398258 KELP23276 732 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 GKP32189 559 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 CCT4P50991 539 aaKnown RBP3.15□□□□□ -1.91
CD47-203ENST00000398258 DGKQP52824 942 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 LINC00205P59089 165 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 EIF4A1P60842 406 aaKnown RBP3.15□□□□□ -1.91
CD47-203ENST00000398258 TUBA4AP68366 448 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 TLE2Q04725 743 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 DNASE1L3Q13609 305 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 BMPR2Q13873 1038 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 TAF5Q15542 800 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 CYP1B1Q16678 543 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 ADCK5Q3MIX3 580 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 TBRG1Q3YBR2 411 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 TREML2Q5T2D2 321 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 INTS11Q5TA45 600 aaKnown RBP3.15□□□□□ -1.91
CD47-203ENST00000398258 RINT1Q6NUQ1 792 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 LRRTM4Q86VH4 590 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 TTC30AQ86WT1 665 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 RASAL3Q86YV0 1011 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 CCDC117Q8IWD4 279 aaPredicted RBP3.15□□□□□ -1.91
CD47-203ENST00000398258 FTSJ3Q8IY81 847 aaKnown RBP3.15□□□□□ -1.91
CD47-203ENST00000398258 TRIM63Q969Q1 353 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 R3HDM4Q96D70 268 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 NAP1L4Q99733 375 aaKnown RBP3.15□□□□□ -1.91
CD47-203ENST00000398258 NPAS1Q99742 590 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 THAP7Q9BT49 309 aaPredicted RBP3.15□□□□□ -1.91
CD47-203ENST00000398258 ABHD16BQ9H3Z7 469 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 EPS8L2Q9H6S3 715 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 FEM1BQ9UK73 627 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 ZBTB1Q9Y2K1 713 aa3.15□□□□□ -1.91
CD47-203ENST00000398258 FAM90A20PA6NIJ5 464 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 LINC01548A6NM66 108 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 EYA2O00167 538 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 SH3BP5O60239 455 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 CER1O95813 267 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 TOP3BO95985 862 aaKnown RBP3.14□□□□□ -1.91
CD47-203ENST00000398258 CYP3A4P08684 503 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 TMEM225BP0DP42 221 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 JUPP14923 745 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 CD53P19397 219 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 MCM5P33992 734 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 DDIT3P35638 169 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 PBX1P40424 430 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 MTHFSP49914 203 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 PRKAA2P54646 552 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 ACTR2P61160 394 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 VAMP2P63027 116 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 DCTN1Q14203 1278 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 TMEM196Q5HYL7 178 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms