RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 LMO2P25791 158 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 NTSR1P30989 418 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 CUL2Q13617 745 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 COL28A1Q2UY09 1125 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 LY6G5CQ5SRR4 150 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 BTBD8Q5XKL5 378 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 ENOSF1Q7L5Y1 443 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 SLC41A1Q8IVJ1 513 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 TERB1Q8NA31 727 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 PDZD8Q8NEN9 1154 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 FOXJ1Q92949 421 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 PCED1BQ96HM7 432 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 EDEM3Q9BZQ6 932 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 ZNHIT6Q9NWK9 470 aaKnown RBP14.35□□□□□ -0.11
SEC13-205ENST00000397101 DEC1Q9P2X7 70 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 CAPN11Q9UMQ6 739 aa14.35□□□□□ -0.11
SEC13-205ENST00000397101 APOBEC2Q9Y235 224 aaKnown RBP14.35□□□□□ -0.11
SEC13-205ENST00000397101 MYO18AQ92614 2054 aaKnown RBP14.34□□□□□ -0.11
SEC13-205ENST00000397101 CBFA2T3O75081 653 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 TULP3O75386 442 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 STAU1O95793 577 aaKnown RBP14.34□□□□□ -0.11
SEC13-205ENST00000397101 GYPCP04921 128 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 ZNF883P0CG24 379 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 GNSP15586 552 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 CD58P19256 250 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 KRT9P35527 623 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 STAT1P42224 750 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 TUBP50607 506 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 ADKP55263 362 aaKnown RBP14.34□□□□□ -0.11
SEC13-205ENST00000397101 PSMC1P62191 440 aaKnown RBP14.34□□□□□ -0.11
SEC13-205ENST00000397101 ZBED6P86452 979 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 KDSRQ06136 332 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 GOLGA8FQ08AF8 430 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 GOLGA8DPQ0D2H9 430 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 TAF10Q12962 218 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 DRAP1Q14919 205 aaPredicted RBP14.34□□□□□ -0.11
SEC13-205ENST00000397101 FIGNQ5HY92 759 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 SYCP2LQ5T4T6 812 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 SNX30Q5VWJ9 437 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 C19orf48Q6RUI8 117 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 CCDC186Q7Z3E2 898 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 CNGA4Q8IV77 575 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 NAXDQ8IW45 347 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 KAT5Q92993 513 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 ZFRQ96KR1 1074 aaKnown RBP14.34□□□□□ -0.11
SEC13-205ENST00000397101 STK33Q9BYT3 514 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 XYLT2Q9H1B5 865 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 SNX25Q9H3E2 840 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 SMPD4Q9NXE4 827 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 PCDHB4Q9Y5E5 795 aa14.34□□□□□ -0.11
SEC13-205ENST00000397101 IGSF10Q6WRI0 2623 aa14.33□□□□□ -0.11
SEC13-205ENST00000397101 A0A1W2PQJ5 194 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 F8VP50 259 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 TACC1O75410 805 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 MBL2P11226 248 aaPredicted RBP14.33□□□□□ -0.12
SEC13-205ENST00000397101 GSDMDP57764 484 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 CYP27A1Q02318 531 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 GCNT1Q02742 428 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 ARID5AQ03989 594 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 TBX2Q13207 712 aaPredicted RBP14.33□□□□□ -0.12
SEC13-205ENST00000397101 ASIC2Q16515 512 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 PLEKHG6Q3KR16 790 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 WDR45BQ5MNZ6 344 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 SFMBT2Q5VUG0 894 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 TOGARAM2Q6ZUX3 1019 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 METTL3Q86U44 580 aaKnown RBP14.33□□□□□ -0.12
SEC13-205ENST00000397101 IPO4Q8TEX9 1081 aaKnown RBP14.33□□□□□ -0.12
SEC13-205ENST00000397101 DNASE2BQ8WZ79 361 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 COL26A1Q96A83 441 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 HSPA12BQ96MM6 686 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 CAMK1GQ96NX5 476 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 GABRG3Q99928 467 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 ELOVL4Q9GZR5 314 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 DNAI2Q9GZS0 605 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 NUCKS1Q9H1E3 243 aaKnown RBP14.33□□□□□ -0.12
SEC13-205ENST00000397101 SMYD3Q9H7B4 428 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 VRTNQ9H8Y1 702 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 ZDHHC4Q9NPG8 344 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 SPHK2Q9NRA0 654 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 AJAP1Q9UKB5 411 aaPredicted RBP14.33□□□□□ -0.12
SEC13-205ENST00000397101 HCN2Q9UL51 889 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 ACACAQ13085 2346 aa14.33□□□□□ -0.12
SEC13-205ENST00000397101 LRRC53A6NM62 1247 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 GFRA2O00451 464 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 NRDCO43847 1150 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 MFAP3LO75121 409 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 GFPT2O94808 682 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 DKK1O94907 266 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 RTN3O95197 1032 aaPredicted RBP14.32□□□□□ -0.12
SEC13-205ENST00000397101 CCDC172P0C7W6 258 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 NDUFV2P19404 249 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 CDH8P55286 799 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 C10orf76Q5T2E6 689 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 SDE2Q6IQ49 451 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 TMPRSS7Q7RTY8 843 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 FMNL3Q8IVF7 1028 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 NUP93Q8N1F7 819 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 DEFB119Q8N690 84 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 OR8K1Q8NGG5 319 aa14.32□□□□□ -0.12
SEC13-205ENST00000397101 OR2I1PQ8NGU4 316 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms