RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 NETO2Q8NC67 525 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 FBF1Q8TES7 1133 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 IRGQQ8WZA9 623 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 MAML1Q92585 1016 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 DONSONQ9NYP3 566 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 PSMC3IPQ9P2W1 217 aaPredicted RBP12.55□□□□□ -0.4
ITGB1-202ENST00000396033 SLC24A2Q9UI40 661 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 RABGEF1Q9UJ41 708 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 ACTL7BQ9Y614 415 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 KBTBD13C9JR72 458 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 AVILO75366 819 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 GCATO75600 419 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 VAV1P15498 845 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 KRT15P19012 456 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 GRK4P32298 578 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 OR1G1P47890 313 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 GEMIN4P57678 1058 aaKnown RBP12.55□□□□□ -0.4
ITGB1-202ENST00000396033 IFRD2Q12894 506 aaPredicted RBP12.55□□□□□ -0.4
ITGB1-202ENST00000396033 NR1H3Q13133 447 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 KLHL38Q2WGJ6 581 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 LRRC8DQ7L1W4 858 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 TAX1BP1Q86VP1 789 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 HTR3CQ8WXA8 447 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 LGMNQ99538 433 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 PRG3Q9Y2Y8 225 aaPredicted RBP12.55□□□□□ -0.4
ITGB1-202ENST00000396033 DGKIO75912 1065 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 ARL13BQ3SXY8 428 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 CPLX4Q7Z7G2 160 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 PGAP3Q96FM1 320 aaPredicted RBP12.54□□□□□ -0.4
ITGB1-202ENST00000396033 FRMD8Q9BZ67 464 aaPredicted RBP12.54□□□□□ -0.4
ITGB1-202ENST00000396033 ACSS3Q9H6R3 686 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 FBXW11Q9UKB1 542 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 NR2E3Q9Y5X4 410 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 C5orf60A6NFR6 353 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 METTL18O95568 372 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 TSHRP16473 764 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 TPI1P60174 286 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 YWHAGP61981 247 aaKnown RBP eCLIP12.54□□□□□ -0.4
ITGB1-202ENST00000396033 DSC1Q08554 894 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 SCAPQ12770 1279 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 DPYSQ14117 519 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 QPCTQ16769 361 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 BSPRYQ5W0U4 402 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 C4orf50Q6ZRC1 276 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 IGDCC3Q8IVU1 814 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 FAM193BQ96PV7 902 aaPredicted RBP12.54□□□□□ -0.4
ITGB1-202ENST00000396033 MLXIPLQ9NP71 852 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 ANLNQ9NQW6 1124 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 TBC1D13Q9NVG8 400 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 SF3B1O75533 1304 aaKnown RBP eCLIP12.54□□□□□ -0.42e-9■■■■■ 80.4
ITGB1-202ENST00000396033 FAM72CH0Y354 149 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 F9P00740 461 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 OR4Q2P0C623 313 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 AP1B1Q10567 949 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 FAM72AQ5TYM5 149 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 PM20D1Q6GTS8 502 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 FAM72DQ6L9T8 149 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 TRABD2AQ86V40 505 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 FAM72BQ86X60 149 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 COLEC11Q9BWP8 271 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 FTHL17Q9BXU8 183 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 PNPLA8Q9NP80 782 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 NKIRAS1Q9NYS0 192 aa12.54□□□□□ -0.4
ITGB1-202ENST00000396033 FKTNO75072 461 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 SELPP16109 830 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 GRIK1P39086 918 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 MAGEA6P43360 314 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 FAM189BP81408 668 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 PKN2Q16513 984 aaKnown RBP12.53□□□□□ -0.4
ITGB1-202ENST00000396033 DENND5BQ6ZUT9 1274 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 TAC4Q86UU9 113 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 COLGALT2Q8IYK4 626 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 SCAMP5Q8TAC9 235 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 CFAP36Q96G28 342 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 PAFAH2Q99487 392 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 FERMT1Q9BQL6 677 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 SEPT10Q9P0V9 454 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 PHF24Q9UPV7 400 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 TEX264Q9Y6I9 313 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 A0A0A0MRY4 1105 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 PPP1R12AO14974 1030 aaPredicted RBP12.53□□□□□ -0.4
ITGB1-202ENST00000396033 PIAS1O75925 651 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 STK10O94804 968 aaKnown RBP12.53□□□□□ -0.4
ITGB1-202ENST00000396033 DRD4P21917 467 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 APLP1P51693 650 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 PDK1Q15118 436 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 SLC39A12Q504Y0 691 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 CCNYQ8ND76 341 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 ZNF296Q8WUU4 475 aaPredicted RBP12.53□□□□□ -0.4
ITGB1-202ENST00000396033 SPATA13Q96N96 652 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 CCDC134Q9H6E4 229 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 WDCPQ9H6R7 721 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 KANSL3Q9P2N6 904 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 FETUBQ9UGM5 382 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 F5H423 210 aaPredicted RBP12.53□□□□□ -0.4
ITGB1-202ENST00000396033 I6L893 689 aaPredicted RBP12.53□□□□□ -0.4
ITGB1-202ENST00000396033 DCLK1O15075 740 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 AMHP03971 560 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 MAP2K2P36507 400 aa12.53□□□□□ -0.4
ITGB1-202ENST00000396033 SLC5A3P53794 718 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms